CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T526T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3526T526TT1344TsynacAacG4223570.8459724295-4297
ORF1ab/nsp3526T526TT1344TsynacAacT422340.08056874295-4297
ORF1ab/nsp3526T526TT1344TsynacAacC422310.07345974295-4297

Details of the mutation T526T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3526T526TacAacG357422All0.000068
ORF1ab/nsp3526T526TacAacT34422All0.000007
ORF1ab/nsp3526T526TacAacC31422All0.000006
ORF1ab/nsp3526T526TacAacG100100AY.4.50.010749
ORF1ab/nsp3526T526TacAacG5454AY.1060.018084
ORF1ab/nsp3526T526TacAacG2042B.1.1.70.000018
ORF1ab/nsp3526T526TacAacC1542B.1.1.70.000013
ORF1ab/nsp3526T526TacAacT742B.1.1.70.000006
ORF1ab/nsp3526T526TacAacG3636B.1.1.4081
ORF1ab/nsp3526T526TacAacG1830AY.40.000028
ORF1ab/nsp3526T526TacAacT830AY.40.000012
ORF1ab/nsp3526T526TacAacC430AY.40.000006
ORF1ab/nsp3526T526TacAacG2727B.1.10.00049
ORF1ab/nsp3526T526TacAacG1515B.1.4270.000757
ORF1ab/nsp3526T526TacAacG1111AY.39.10.000436
ORF1ab/nsp3526T526TacAacG1010P.10.000158
ORF1ab/nsp3526T526TacAacG48AY.1030.000025
ORF1ab/nsp3526T526TacAacT48AY.1030.000025
ORF1ab/nsp3526T526TacAacG78B.1.617.20.000026
ORF1ab/nsp3526T526TacAacC18B.1.617.20.000004
ORF1ab/nsp3526T526TacAacG77AY.430.000031
ORF1ab/nsp3526T526TacAacG66B.1.3510.000178
ORF1ab/nsp3526T526TacAacT55B.1.6370.000365
ORF1ab/nsp3526T526TacAacG34AY.840.001312
ORF1ab/nsp3526T526TacAacT14AY.840.000437
ORF1ab/nsp3526T526TacAacT24B.1.1.2140.000111
ORF1ab/nsp3526T526TacAacC24B.1.1.2140.000111
ORF1ab/nsp3526T526TacAacG23AY.250.000012
ORF1ab/nsp3526T526TacAacC13AY.250.000006
ORF1ab/nsp3526T526TacAacC13AY.30.00001
ORF1ab/nsp3526T526TacAacT13AY.30.00001
ORF1ab/nsp3526T526TacAacG13AY.30.00001
ORF1ab/nsp3526T526TacAacG33B.10.000027
ORF1ab/nsp3526T526TacAacC23B.1.20.000018
ORF1ab/nsp3526T526TacAacT13B.1.20.000009
ORF1ab/nsp3526T526TacAacC33B.1.258.170.000312
ORF1ab/nsp3526T526TacAacG33P.30.004785
ORF1ab/nsp3526T526TacAacG22B.1.1.3980.006452
ORF1ab/nsp3526T526TacAacG12B.1.1600.000031
ORF1ab/nsp3526T526TacAacC12B.1.1600.000031
ORF1ab/nsp3526T526TacAacG22B.1.4290.000047
ORF1ab/nsp3526T526TacAacG22B.1.5250.000226
ORF1ab/nsp3526T526TacAacG11AY.1110.000183
ORF1ab/nsp3526T526TacAacG11AY.1140.000231
ORF1ab/nsp3526T526TacAacG11AY.1180.000063
ORF1ab/nsp3526T526TacAacG11AY.1200.000037
ORF1ab/nsp3526T526TacAacG11AY.200.000039
ORF1ab/nsp3526T526TacAacG11AY.260.000028
ORF1ab/nsp3526T526TacAacG11AY.290.000016
ORF1ab/nsp3526T526TacAacT11AY.3.10.000085
ORF1ab/nsp3526T526TacAacG11AY.360.000148
ORF1ab/nsp3526T526TacAacG11AY.4.20.000022
ORF1ab/nsp3526T526TacAacG11AY.420.00004
ORF1ab/nsp3526T526TacAacG11AY.440.000006
ORF1ab/nsp3526T526TacAacG11AY.60.000041
ORF1ab/nsp3526T526TacAacT11AY.610.000105
ORF1ab/nsp3526T526TacAacG11AY.9.20.000037
ORF1ab/nsp3526T526TacAacG11AY.990.001049
ORF1ab/nsp3526T526TacAacG11B.1.1.100.001115
ORF1ab/nsp3526T526TacAacG11B.1.1.1280.007092
ORF1ab/nsp3526T526TacAacT11B.1.1.1480.008772
ORF1ab/nsp3526T526TacAacG11B.1.1.1710.003676
ORF1ab/nsp3526T526TacAacG11B.1.1.2940.001266
ORF1ab/nsp3526T526TacAacG11B.1.1.4320.001266
ORF1ab/nsp3526T526TacAacG11B.1.1.5190.00004
ORF1ab/nsp3526T526TacAacT11B.1.1770.000013
ORF1ab/nsp3526T526TacAacG11B.1.177.430.001477
ORF1ab/nsp3526T526TacAacG11B.1.177.600.000218
ORF1ab/nsp3526T526TacAacC11B.1.2360.002053
ORF1ab/nsp3526T526TacAacT11B.1.5090.000866
ORF1ab/nsp3526T526TacAacG11B.1.617.10.000129