CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T492T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3492T492TT1310TsynacTacA9226250.6778744193-4195
ORF1ab/nsp3492T492TT1310TsynacTacC9222840.3080264193-4195
ORF1ab/nsp3492T492TT1310TsynacTacG922130.01409984193-4195

Details of the mutation T492T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3492T492TacTacA625922All0.00012
ORF1ab/nsp3492T492TacTacC284922All0.000054
ORF1ab/nsp3492T492TacTacG13922All0.000002
ORF1ab/nsp3492T492TacTacA587587B.1.177.110.996604
ORF1ab/nsp3492T492TacTacC182187B.1.1.70.000163
ORF1ab/nsp3492T492TacTacA5187B.1.1.70.000004
ORF1ab/nsp3492T492TacTacC1418AY.40.000022
ORF1ab/nsp3492T492TacTacA418AY.40.000006
ORF1ab/nsp3492T492TacTacC1717B.1.1600.00053
ORF1ab/nsp3492T492TacTacG814AY.1030.00005
ORF1ab/nsp3492T492TacTacC614AY.1030.000037
ORF1ab/nsp3492T492TacTacC88AY.1190.000282
ORF1ab/nsp3492T492TacTacC57AY.430.000022
ORF1ab/nsp3492T492TacTacA27AY.430.000009
ORF1ab/nsp3492T492TacTacC77AY.990.007345
ORF1ab/nsp3492T492TacTacC57B.10.000046
ORF1ab/nsp3492T492TacTacG27B.10.000018
ORF1ab/nsp3492T492TacTacA66AY.46.40.000987
ORF1ab/nsp3492T492TacTacC66B.1.177.570.001686
ORF1ab/nsp3492T492TacTacA56B.1.20.000044
ORF1ab/nsp3492T492TacTacC16B.1.20.000009
ORF1ab/nsp3492T492TacTacA23AY.250.000012
ORF1ab/nsp3492T492TacTacC13AY.250.000006
ORF1ab/nsp3492T492TacTacC23AY.440.000012
ORF1ab/nsp3492T492TacTacA13AY.440.000006
ORF1ab/nsp3492T492TacTacA33B.1.5260.000071
ORF1ab/nsp3492T492TacTacC23B.1.617.20.000008
ORF1ab/nsp3492T492TacTacG13B.1.617.20.000004
ORF1ab/nsp3492T492TacTacC22AY.290.000032
ORF1ab/nsp3492T492TacTacC22AY.30.00002
ORF1ab/nsp3492T492TacTacA12AY.390.000025
ORF1ab/nsp3492T492TacTacC12AY.390.000025
ORF1ab/nsp3492T492TacTacA22AY.99.20.000184
ORF1ab/nsp3492T492TacTacC22B.1.2100.004264
ORF1ab/nsp3492T492TacTacC22P.10.000032
ORF1ab/nsp3492T492TacTacC11AY.1020.000027
ORF1ab/nsp3492T492TacTacC11AY.1060.000335
ORF1ab/nsp3492T492TacTacC11AY.1200.000037
ORF1ab/nsp3492T492TacTacA11AY.200.000039
ORF1ab/nsp3492T492TacTacC11AY.4.50.000107
ORF1ab/nsp3492T492TacTacA11AY.46.30.000934
ORF1ab/nsp3492T492TacTacC11AY.710.000475
ORF1ab/nsp3492T492TacTacC11AY.910.00073
ORF1ab/nsp3492T492TacTacC11AY.98.10.000048
ORF1ab/nsp3492T492TacTacC11B.1.10.000018
ORF1ab/nsp3492T492TacTacA11B.1.1.1570.000913
ORF1ab/nsp3492T492TacTacC11B.1.1.3060.000438
ORF1ab/nsp3492T492TacTacG11B.1.1.3560.008547
ORF1ab/nsp3492T492TacTacA11B.1.1.3690.000446
ORF1ab/nsp3492T492TacTacC11B.1.160.100.008065
ORF1ab/nsp3492T492TacTacA11B.1.177.600.000218
ORF1ab/nsp3492T492TacTacA11B.1.177.810.000189
ORF1ab/nsp3492T492TacTacC11B.1.2340.000132
ORF1ab/nsp3492T492TacTacG11B.1.2580.000067
ORF1ab/nsp3492T492TacTacA11B.1.3110.000275
ORF1ab/nsp3492T492TacTacC11B.1.3510.00003
ORF1ab/nsp3492T492TacTacC11B.1.4270.00005
ORF1ab/nsp3492T492TacTacC11B.1.5960.000087
ORF1ab/nsp3492T492TacTacC11B.1.6200.000946
ORF1ab/nsp3492T492TacTacC11B.1.6370.000073
ORF1ab/nsp3492T492TacTacC11B.400.000364
ORF1ab/nsp3492T492TacTacC11P.1.140.000048
ORF1ab/nsp3492T492TacTacC11P.40.003802