CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T485T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3485T485TT1303TsynacTacC2361870.7923734172-4174
ORF1ab/nsp3485T485TT1303TsynacTacA236470.1991534172-4174
ORF1ab/nsp3485T485TT1303TsynacTacG23620.008474584172-4174

Details of the mutation T485T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3485T485TacTacC187236All0.000036
ORF1ab/nsp3485T485TacTacA47236All0.000009
ORF1ab/nsp3485T485TacTacG2236All0
ORF1ab/nsp3485T485TacTacC3536B.1.617.20.000132
ORF1ab/nsp3485T485TacTacG136B.1.617.20.000004
ORF1ab/nsp3485T485TacTacC2424AY.40.000037
ORF1ab/nsp3485T485TacTacC2224AY.430.000097
ORF1ab/nsp3485T485TacTacA124AY.430.000004
ORF1ab/nsp3485T485TacTacG124AY.430.000004
ORF1ab/nsp3485T485TacTacC2022B.1.1.70.000018
ORF1ab/nsp3485T485TacTacA222B.1.1.70.000002
ORF1ab/nsp3485T485TacTacC1818B.1.1.2420.782609
ORF1ab/nsp3485T485TacTacC1111AY.30.000109
ORF1ab/nsp3485T485TacTacA79AY.440.000043
ORF1ab/nsp3485T485TacTacC29AY.440.000012
ORF1ab/nsp3485T485TacTacA88B.1.20.00007
ORF1ab/nsp3485T485TacTacA66AY.7.10.000676
ORF1ab/nsp3485T485TacTacA34AY.420.000121
ORF1ab/nsp3485T485TacTacC14AY.420.00004
ORF1ab/nsp3485T485TacTacA24B.1.10.000036
ORF1ab/nsp3485T485TacTacC24B.1.10.000036
ORF1ab/nsp3485T485TacTacA24B.1.6210.000177
ORF1ab/nsp3485T485TacTacC24B.1.6210.000177
ORF1ab/nsp3485T485TacTacC33AY.1030.000019
ORF1ab/nsp3485T485TacTacC33AY.1190.000106
ORF1ab/nsp3485T485TacTacC33AY.250.000018
ORF1ab/nsp3485T485TacTacA33B.1.1.2840.000322
ORF1ab/nsp3485T485TacTacC33B.1.160.160.002788
ORF1ab/nsp3485T485TacTacA12AY.1000.000046
ORF1ab/nsp3485T485TacTacC12AY.1000.000046
ORF1ab/nsp3485T485TacTacC22AY.1200.000074
ORF1ab/nsp3485T485TacTacC22AY.390.000049
ORF1ab/nsp3485T485TacTacA22AY.4.20.000043
ORF1ab/nsp3485T485TacTacC22B.1.2210.000142
ORF1ab/nsp3485T485TacTacA22B.1.2580.000133
ORF1ab/nsp3485T485TacTacA22C.360.001821
ORF1ab/nsp3485T485TacTacC22C.370.000232
ORF1ab/nsp3485T485TacTacC110.055556
ORF1ab/nsp3485T485TacTacC11AY.1170.000085
ORF1ab/nsp3485T485TacTacC11AY.1210.000135
ORF1ab/nsp3485T485TacTacC11AY.240.000431
ORF1ab/nsp3485T485TacTacC11AY.320.000532
ORF1ab/nsp3485T485TacTacC11AY.34.10.00051
ORF1ab/nsp3485T485TacTacC11AY.370.000316
ORF1ab/nsp3485T485TacTacC11AY.450.000122
ORF1ab/nsp3485T485TacTacC11AY.46.50.000198
ORF1ab/nsp3485T485TacTacC11AY.470.000031
ORF1ab/nsp3485T485TacTacC11AY.890.004902
ORF1ab/nsp3485T485TacTacC11B.10.000009
ORF1ab/nsp3485T485TacTacC11B.1.1.2220.000204
ORF1ab/nsp3485T485TacTacA11B.1.1.250.000569
ORF1ab/nsp3485T485TacTacC11B.1.1.2690.001353
ORF1ab/nsp3485T485TacTacC11B.1.1.3060.000438
ORF1ab/nsp3485T485TacTacC11B.1.1.3350.012987
ORF1ab/nsp3485T485TacTacA11B.1.1.4330.001425
ORF1ab/nsp3485T485TacTacC11B.1.1.5260.003546
ORF1ab/nsp3485T485TacTacA11B.1.1.700.000341
ORF1ab/nsp3485T485TacTacA11B.1.1600.000031
ORF1ab/nsp3485T485TacTacC11B.1.1770.000013
ORF1ab/nsp3485T485TacTacA11B.1.177.230.003236
ORF1ab/nsp3485T485TacTacC11B.1.177.670.007634
ORF1ab/nsp3485T485TacTacC11B.1.2430.00007
ORF1ab/nsp3485T485TacTacC11B.1.258.170.000104
ORF1ab/nsp3485T485TacTacA11B.1.3510.00003
ORF1ab/nsp3485T485TacTacC11B.1.3770.004566
ORF1ab/nsp3485T485TacTacC11B.1.4270.00005
ORF1ab/nsp3485T485TacTacC11B.1.4730.019231
ORF1ab/nsp3485T485TacTacC11B.1.5230.002451
ORF1ab/nsp3485T485TacTacC11B.1.5260.000024
ORF1ab/nsp3485T485TacTacC11P.10.000016
ORF1ab/nsp3485T485TacTacC11P.30.001595
ORF1ab/nsp3485T485TacTacC11R.10.00009