CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T428R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3428T428RT1246RnonsynACtCGt530.64001-4003
ORF1ab/nsp3428T428RT1246RnonsynaCTaGA510.24001-4003
ORF1ab/nsp3428T428RT1246RnonsynACTCGA510.24001-4003

Details of the mutation T428R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3428T428RACtCGt35All0.000001
ORF1ab/nsp3428T428RaCTaGA15All0
ORF1ab/nsp3428T428RACTCGA15All0
ORF1ab/nsp3428T428RaCTaGA13B.1.1.330.000421
ORF1ab/nsp3428T428RACTCGA13B.1.1.330.000421
ORF1ab/nsp3428T428RACtCGt13B.1.1.330.000421
ORF1ab/nsp3428T428RACtCGt11B.1.1.70.000001
ORF1ab/nsp3428T428RACtCGt11B.1.617.10.000129