CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T428I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3428T428IT1246InonsynaCtaTt24957249530.999844001-4003
ORF1ab/nsp3428T428IT1246InonsynaCTaTC2495730.0001202074001-4003
ORF1ab/nsp3428T428IT1246InonsynaCTaTA2495710.00004006894001-4003

Details of the mutation T428I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3428T428IaCtaTt2495324957All0.004773
ORF1ab/nsp3428T428IaCTaTC324957All0.000001
ORF1ab/nsp3428T428IaCTaTA124957All0
ORF1ab/nsp3428T428IaCtaTt85128512C.370.987929
ORF1ab/nsp3428T428IaCtaTt30053005B.1.1.10.981705
ORF1ab/nsp3428T428IaCtaTt17411741C.36.30.987521
ORF1ab/nsp3428T428IaCtaTt12841284C.350.993808
ORF1ab/nsp3428T428IaCtaTt10861086C.360.989071
ORF1ab/nsp3428T428IaCtaTt939939C.160.995758
ORF1ab/nsp3428T428IaCtaTt661661B.1.1.70.000592
ORF1ab/nsp3428T428IaCtaTt655655AY.40.001019
ORF1ab/nsp3428T428IaCtaTt579579C.301
ORF1ab/nsp3428T428IaCtaTt408408C.10.976077
ORF1ab/nsp3428T428IaCtaTt385385C.180.997409
ORF1ab/nsp3428T428IaCtaTt364364C.37.10.95288
ORF1ab/nsp3428T428IaCtaTt363363C.36.3.10.986413
ORF1ab/nsp3428T428IaCtaTt241241C.36.11
ORF1ab/nsp3428T428IaCtaTt231231C.141
ORF1ab/nsp3428T428IaCtaTt226226C.1.20.961702
ORF1ab/nsp3428T428IaCtaTt224224C.81
ORF1ab/nsp3428T428IaCtaTt200200B.10.001832
ORF1ab/nsp3428T428IaCtaTt172172C.231
ORF1ab/nsp3428T428IaCtaTt168168P.20.031355
ORF1ab/nsp3428T428IaCtaTt164164AY.1030.001018
ORF1ab/nsp3428T428IaCtaTt161161B.1.20.001418
ORF1ab/nsp3428T428IaCtaTt149149C.30.11
ORF1ab/nsp3428T428IaCtaTt148148C.2.10.986667
ORF1ab/nsp3428T428IaCtaTt139139C.121
ORF1ab/nsp3428T428IaCtaTt136136C.261
ORF1ab/nsp3428T428IaCtaTt130130C.30.992366
ORF1ab/nsp3428T428IaCtaTt122122C.380.983871
ORF1ab/nsp3428T428IaCtaTt100100C.41
ORF1ab/nsp3428T428IaCtaTt9595B.1.1.1530.104053
ORF1ab/nsp3428T428IaCtaTt9494C.111
ORF1ab/nsp3428T428IaCtaTt9292B.1.10.001669
ORF1ab/nsp3428T428IaCtaTt8282B.1.177.570.02304
ORF1ab/nsp3428T428IaCtaTt7676B.1.1.3750.904762
ORF1ab/nsp3428T428IaCtaTt6767B.1.617.20.000252
ORF1ab/nsp3428T428IaCtaTt6262C.21
ORF1ab/nsp3428T428IaCtaTt5757B.1.5250.00645
ORF1ab/nsp3428T428IaCtaTt5757B.1.5260.00134
ORF1ab/nsp3428T428IaCtaTt5556C.310.982143
ORF1ab/nsp3428T428IaCTaTC156C.310.017857
ORF1ab/nsp3428T428IaCtaTt5454C.271
ORF1ab/nsp3428T428IaCtaTt5252C.390.981132
ORF1ab/nsp3428T428IaCtaTt4747AY.440.000286
ORF1ab/nsp3428T428IaCtaTt4545B.1.1770.000593
ORF1ab/nsp3428T428IaCtaTt4343C.321
ORF1ab/nsp3428T428IaCtaTt4141B.1.3510.001219
ORF1ab/nsp3428T428IaCtaTt3939C.131
ORF1ab/nsp3428T428IaCtaTt3737C.191
ORF1ab/nsp3428T428IaCtaTt3636C.401
ORF1ab/nsp3428T428IaCtaTt3535AY.430.000155
ORF1ab/nsp3428T428IaCtaTt3333B.1.1.3720.022727
ORF1ab/nsp3428T428IaCtaTt3232AY.330.002137
ORF1ab/nsp3428T428IaCtaTt3232C.90.969697
ORF1ab/nsp3428T428IaCtaTt3030B.1.6090.014382
ORF1ab/nsp3428T428IaCtaTt2929C.36.21
ORF1ab/nsp3428T428IaCtaTt2929C.71
ORF1ab/nsp3428T428IaCtaTt2727C.341
ORF1ab/nsp3428T428IaCtaTt2727C.61
ORF1ab/nsp3428T428IaCtaTt2626AY.250.000156
ORF1ab/nsp3428T428IaCtaTt2525C.281
ORF1ab/nsp3428T428IaCtaTt2323P.10.000362
ORF1ab/nsp3428T428IaCtaTt2222B.1.1.2840.002363
ORF1ab/nsp3428T428IaCtaTt1919AY.290.0003
ORF1ab/nsp3428T428IaCtaTt1919B.1.1.5190.000755
ORF1ab/nsp3428T428IaCtaTt1919B.1.1600.000593
ORF1ab/nsp3428T428IaCtaTt1818B.1.214.20.010791
ORF1ab/nsp3428T428IaCtaTt1818B.1.4290.000424
ORF1ab/nsp3428T428IaCtaTt1717C.331
ORF1ab/nsp3428T428IaCtaTt1616B.1.4270.000808
ORF1ab/nsp3428T428IaCtaTt1515C.290.9375
ORF1ab/nsp3428T428IaCtaTt1515Q.10.001895
ORF1ab/nsp3428T428IaCtaTt1414C.221
ORF1ab/nsp3428T428IaCtaTt1313AY.1200.000483
ORF1ab/nsp3428T428IaCtaTt1313AY.30.000129
ORF1ab/nsp3428T428IaCtaTt1313B.1.2580.000865
ORF1ab/nsp3428T428IaCtaTt1313C.1.11
ORF1ab/nsp3428T428IaCtaTt1313C.201
ORF1ab/nsp3428T428IaCtaTt1212AY.1020.000318
ORF1ab/nsp3428T428IaCtaTt1212AY.260.00034
ORF1ab/nsp3428T428IaCtaTt1212B.1.258.170.001248
ORF1ab/nsp3428T428IaCtaTt1212C.170.666667
ORF1ab/nsp3428T428IaCtaTt1111AY.1060.003684
ORF1ab/nsp3428T428IaCtaTt1111AY.200.000428
ORF1ab/nsp3428T428IaCtaTt1111B.1.177.540.006671
ORF1ab/nsp3428T428IaCtaTt1111C.51
ORF1ab/nsp3428T428IaCtaTt1010AY.530.002875
ORF1ab/nsp3428T428IaCtaTt1010AY.99.20.000922
ORF1ab/nsp3428T428IaCtaTt1010B.1.177.810.001893
ORF1ab/nsp3428T428IaCtaTt99AY.140.000792
ORF1ab/nsp3428T428IaCtaTt88B.1.1.280.00249
ORF1ab/nsp3428T428IaCtaTt88B.1.5680.008889
ORF1ab/nsp3428T428IaCtaTt88C.251
ORF1ab/nsp3428T428IaCtaTt88P.1.150.001859
ORF1ab/nsp3428T428IaCtaTt77AY.1170.000592
ORF1ab/nsp3428T428IaCtaTt77AY.460.000729
ORF1ab/nsp3428T428IaCtaTt77AY.50.000145
ORF1ab/nsp3428T428IaCtaTt77B.1.1.3010.008255
ORF1ab/nsp3428T428IaCtaTt77B.1.5240.009845
ORF1ab/nsp3428T428IaCtaTt66AY.360.000889
ORF1ab/nsp3428T428IaCtaTt66AY.390.000148
ORF1ab/nsp3428T428IaCtaTt66B0.000767
ORF1ab/nsp3428T428IaCtaTt66B.1.1.2940.007595
ORF1ab/nsp3428T428IaCtaTt66B.1.6280.002114
ORF1ab/nsp3428T428IaCtaTt66C.210.857143
ORF1ab/nsp3428T428IaCtaTt55AY.1000.00023
ORF1ab/nsp3428T428IaCtaTt55AY.3.10.000426
ORF1ab/nsp3428T428IaCtaTt55AY.4.20.000108
ORF1ab/nsp3428T428IaCtaTt55B.1.1.3480.003981
ORF1ab/nsp3428T428IaCtaTt55B.1.2210.000355
ORF1ab/nsp3428T428IaCtaTt55B.1.230.030303
ORF1ab/nsp3428T428IaCtaTt55B.1.2430.000348
ORF1ab/nsp3428T428IaCtaTt55B.1.360.00073
ORF1ab/nsp3428T428IaCtaTt55B.1.5750.001517
ORF1ab/nsp3428T428IaCtaTt55D.20.000375
ORF1ab/nsp3428T428IaCtaTt240.111111
ORF1ab/nsp3428T428IaCTaTA140.055556
ORF1ab/nsp3428T428IaCTaTC140.055556
ORF1ab/nsp3428T428IaCtaTt44A.2.5.20.006289
ORF1ab/nsp3428T428IaCtaTt44AY.4.50.00043
ORF1ab/nsp3428T428IaCtaTt44AY.470.000124
ORF1ab/nsp3428T428IaCtaTt44AY.7.20.002237
ORF1ab/nsp3428T428IaCtaTt44AY.750.000224
ORF1ab/nsp3428T428IaCtaTt44AY.9.20.000147
ORF1ab/nsp3428T428IaCtaTt44B.1.1.250.002274
ORF1ab/nsp3428T428IaCtaTt44B.1.1.4340.001394
ORF1ab/nsp3428T428IaCtaTt44B.1.1.5260.014184
ORF1ab/nsp3428T428IaCtaTt44B.1.1.700.001364
ORF1ab/nsp3428T428IaCtaTt44B.1.258.140.003922
ORF1ab/nsp3428T428IaCtaTt44B.1.5130.055556
ORF1ab/nsp3428T428IaCtaTt44B.1.5960.000349
ORF1ab/nsp3428T428IaCtaTt44B.1.617.10.000516
ORF1ab/nsp3428T428IaCtaTt44C.101
ORF1ab/nsp3428T428IaCtaTt44P.1.70.001277
ORF1ab/nsp3428T428IaCtaTt33AY.1130.000427
ORF1ab/nsp3428T428IaCtaTt33AY.340.000291
ORF1ab/nsp3428T428IaCtaTt33AY.420.000121
ORF1ab/nsp3428T428IaCtaTt33AY.640.001786
ORF1ab/nsp3428T428IaCtaTt33AY.75.10.000541
ORF1ab/nsp3428T428IaCtaTt33AY.880.002653
ORF1ab/nsp3428T428IaCtaTt33AY.9.10.000251
ORF1ab/nsp3428T428IaCtaTt33B.1.1.4480.006098
ORF1ab/nsp3428T428IaCtaTt33B.1.1.500.002037
ORF1ab/nsp3428T428IaCtaTt33B.1.177.210.000229
ORF1ab/nsp3428T428IaCtaTt33B.1.3990.005803
ORF1ab/nsp3428T428IaCtaTt33B.1.4220.002437
ORF1ab/nsp3428T428IaCtaTt33Q.80.000495
ORF1ab/nsp3428T428IaCtaTt22A0.000774
ORF1ab/nsp3428T428IaCtaTt22AY.1090.001479
ORF1ab/nsp3428T428IaCtaTt22AY.1190.000071
ORF1ab/nsp3428T428IaCtaTt22AY.230.000139
ORF1ab/nsp3428T428IaCtaTt22AY.46.40.000329
ORF1ab/nsp3428T428IaCtaTt22AY.60.000082
ORF1ab/nsp3428T428IaCtaTt22AY.670.000929
ORF1ab/nsp3428T428IaCtaTt22AY.98.10.000097
ORF1ab/nsp3428T428IaCtaTt22B.1.1.1890.003026
ORF1ab/nsp3428T428IaCtaTt22B.1.1.1940.009901
ORF1ab/nsp3428T428IaCtaTt22B.1.1.2200.003717
ORF1ab/nsp3428T428IaCtaTt22B.1.1.2220.000408
ORF1ab/nsp3428T428IaCtaTt22B.1.1.370.000386
ORF1ab/nsp3428T428IaCtaTt22B.1.1.3980.006452
ORF1ab/nsp3428T428IaCtaTt22B.1.1.4020.022222
ORF1ab/nsp3428T428IaCtaTt22B.1.1.4090.005666
ORF1ab/nsp3428T428IaCtaTt22B.1.1.520.02439
ORF1ab/nsp3428T428IaCtaTt22B.1.1.5280.009615
ORF1ab/nsp3428T428IaCtaTt22B.1.1.830.00542
ORF1ab/nsp3428T428IaCtaTt22B.1.1700.008621
ORF1ab/nsp3428T428IaCtaTt22B.1.3110.000549
ORF1ab/nsp3428T428IaCtaTt22B.1.36.10.002281
ORF1ab/nsp3428T428IaCtaTt22B.1.3750.001639
ORF1ab/nsp3428T428IaCtaTt22B.1.3960.001411
ORF1ab/nsp3428T428IaCtaTt22B.1.5760.001813
ORF1ab/nsp3428T428IaCtaTt22B.1.6210.000177
ORF1ab/nsp3428T428IaCtaTt22B.1.780.017094
ORF1ab/nsp3428T428IaCtaTt22P.1.10.000635
ORF1ab/nsp3428T428IaCtaTt22P.1.120.000968
ORF1ab/nsp3428T428IaCtaTt11A.270.001656
ORF1ab/nsp3428T428IaCtaTt11AD.20.000219
ORF1ab/nsp3428T428IaCtaTt11AY.10.000396
ORF1ab/nsp3428T428IaCtaTt11AY.1070.000466
ORF1ab/nsp3428T428IaCtaTt11AY.1160.000287
ORF1ab/nsp3428T428IaCtaTt11AY.120.000316
ORF1ab/nsp3428T428IaCtaTt11AY.1210.000135
ORF1ab/nsp3428T428IaCtaTt11AY.130.000161
ORF1ab/nsp3428T428IaCtaTt11AY.150.002222
ORF1ab/nsp3428T428IaCtaTt11AY.300.000396
ORF1ab/nsp3428T428IaCtaTt11AY.320.000532
ORF1ab/nsp3428T428IaCtaTt11AY.34.10.00051
ORF1ab/nsp3428T428IaCtaTt11AY.350.000233
ORF1ab/nsp3428T428IaCtaTt11AY.380.000499
ORF1ab/nsp3428T428IaCtaTt11AY.39.10.00004
ORF1ab/nsp3428T428IaCtaTt11AY.4.10.000737
ORF1ab/nsp3428T428IaCtaTt11AY.410.000294
ORF1ab/nsp3428T428IaCtaTt11AY.450.000122
ORF1ab/nsp3428T428IaCtaTt11AY.46.60.000072
ORF1ab/nsp3428T428IaCtaTt11AY.540.000095
ORF1ab/nsp3428T428IaCtaTt11AY.610.000105
ORF1ab/nsp3428T428IaCtaTt11AY.620.000436
ORF1ab/nsp3428T428IaCtaTt11AY.680.000274
ORF1ab/nsp3428T428IaCtaTt11AY.70.000196
ORF1ab/nsp3428T428IaCtaTt11AY.740.000116
ORF1ab/nsp3428T428IaCtaTt11AY.770.001127
ORF1ab/nsp3428T428IaCtaTt11AY.90.000068
ORF1ab/nsp3428T428IaCtaTt11AY.910.00073
ORF1ab/nsp3428T428IaCtaTt11AY.920.000287
ORF1ab/nsp3428T428IaCtaTt11AZ.10.000867
ORF1ab/nsp3428T428IaCtaTt11B.1.1.1640.005155
ORF1ab/nsp3428T428IaCtaTt11B.1.1.2140.000055
ORF1ab/nsp3428T428IaCtaTt11B.1.1.3060.000438
ORF1ab/nsp3428T428IaCtaTt11B.1.1.3180.000302
ORF1ab/nsp3428T428IaCtaTt11B.1.1.3290.003846
ORF1ab/nsp3428T428IaCtaTt11B.1.1.330.000421
ORF1ab/nsp3428T428IaCtaTt11B.1.1.580.005376
ORF1ab/nsp3428T428IaCtaTt11B.1.1.610.008772
ORF1ab/nsp3428T428IaCtaTt11B.1.1400.018868
ORF1ab/nsp3428T428IaCtaTt11B.1.160.170.001701
ORF1ab/nsp3428T428IaCtaTt11B.1.160.280.002924
ORF1ab/nsp3428T428IaCtaTt11B.1.177.40.000211
ORF1ab/nsp3428T428IaCtaTt11B.1.177.440.000519
ORF1ab/nsp3428T428IaCtaTt11B.1.177.60.000977
ORF1ab/nsp3428T428IaCtaTt11B.1.177.70.000165
ORF1ab/nsp3428T428IaCtaTt11B.1.177.840.006667
ORF1ab/nsp3428T428IaCtaTt11B.1.177.90.001332
ORF1ab/nsp3428T428IaCtaTt11B.1.1790.003759
ORF1ab/nsp3428T428IaCtaTt11B.1.2050.02381
ORF1ab/nsp3428T428IaCtaTt11B.1.2100.002132
ORF1ab/nsp3428T428IaCtaTt11B.1.214.30.007143
ORF1ab/nsp3428T428IaCtaTt11B.1.2400.000216
ORF1ab/nsp3428T428IaCtaTt11B.1.3240.001605
ORF1ab/nsp3428T428IaCtaTt11B.1.3320.003497
ORF1ab/nsp3428T428IaCtaTt11B.1.36.180.00042
ORF1ab/nsp3428T428IaCtaTt11B.1.36.210.00216
ORF1ab/nsp3428T428IaCtaTt11B.1.36.290.000517
ORF1ab/nsp3428T428IaCtaTt11B.1.36.350.002604
ORF1ab/nsp3428T428IaCtaTt11B.1.3670.000792
ORF1ab/nsp3428T428IaCtaTt11B.1.3980.002976
ORF1ab/nsp3428T428IaCtaTt11B.1.4040.001302
ORF1ab/nsp3428T428IaCtaTt11B.1.4160.001269
ORF1ab/nsp3428T428IaCtaTt11B.1.438.10.000107
ORF1ab/nsp3428T428IaCtaTt11B.1.4700.001404
ORF1ab/nsp3428T428IaCtaTt11B.1.5330.009615
ORF1ab/nsp3428T428IaCtaTt11B.1.5400.009709
ORF1ab/nsp3428T428IaCtaTt11B.1.5610.000397
ORF1ab/nsp3428T428IaCtaTt11B.1.5950.000261
ORF1ab/nsp3428T428IaCtaTt11B.1.6000.005848
ORF1ab/nsp3428T428IaCtaTt11B.1.6230.000536
ORF1ab/nsp3428T428IaCtaTt11B.1.810.021277
ORF1ab/nsp3428T428IaCtaTt11B.1.9.50.005682
ORF1ab/nsp3428T428IaCTaTC11B.60.00091
ORF1ab/nsp3428T428IaCtaTt11N.40.004255
ORF1ab/nsp3428T428IaCtaTt11N.50.001767
ORF1ab/nsp3428T428IaCtaTt11P.1.130.000898
ORF1ab/nsp3428T428IaCtaTt11P.1.20.001156
ORF1ab/nsp3428T428IaCtaTt11P.70.004367