CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T428A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3428T428AT1246AnonsynActGct93920.9892474001-4003
ORF1ab/nsp3428T428AT1246AnonsynAcTGcC9310.01075274001-4003

Details of the mutation T428A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3428T428AActGct9293All0.000018
ORF1ab/nsp3428T428AAcTGcC193All0
ORF1ab/nsp3428T428AActGct1111B.1.10.0002
ORF1ab/nsp3428T428AActGct1010B.1.1.2160.008905
ORF1ab/nsp3428T428AActGct99B.1.1.70.000008
ORF1ab/nsp3428T428AActGct88AY.1030.00005
ORF1ab/nsp3428T428AActGct66AY.1000.000276
ORF1ab/nsp3428T428AActGct66B.1.617.20.000023
ORF1ab/nsp3428T428AActGct55B.10.000046
ORF1ab/nsp3428T428AActGct55B.1.20.000044
ORF1ab/nsp3428T428AActGct44AY.4.2.10.000596
ORF1ab/nsp3428T428AActGct44B.1.6370.000292
ORF1ab/nsp3428T428AActGct33B0.000383
ORF1ab/nsp3428T428AActGct33B.1.4690.01083
ORF1ab/nsp3428T428AAcTGcC120.055556
ORF1ab/nsp3428T428AActGct120.055556
ORF1ab/nsp3428T428AActGct11AY.1020.000027
ORF1ab/nsp3428T428AActGct11AY.1130.000142
ORF1ab/nsp3428T428AActGct11AY.1190.000035
ORF1ab/nsp3428T428AActGct11AY.30.00001
ORF1ab/nsp3428T428AActGct11AY.360.000148
ORF1ab/nsp3428T428AActGct11AY.40.000002
ORF1ab/nsp3428T428AActGct11AY.400.000964
ORF1ab/nsp3428T428AActGct11AY.430.000004
ORF1ab/nsp3428T428AActGct11AY.440.000006
ORF1ab/nsp3428T428AActGct11AY.840.000437
ORF1ab/nsp3428T428AActGct11B.1.1.5190.00004
ORF1ab/nsp3428T428AActGct11B.1.1.570.011494
ORF1ab/nsp3428T428AActGct11B.1.1570.002985
ORF1ab/nsp3428T428AActGct11B.1.360.000146
ORF1ab/nsp3428T428AActGct11B.1.4090.000781
ORF1ab/nsp3428T428AActGct11B.1.5260.000024
ORF1ab/nsp3428T428AActGct11B.1.5270.003704