CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T424I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3424T424IT1242InonsynaCtaTt237623740.9991583989-3991
ORF1ab/nsp3424T424IT1242InonsynaCTaTA237610.0004208753989-3991
ORF1ab/nsp3424T424IT1242InonsynaCTaTC237610.0004208753989-3991

Details of the mutation T424I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3424T424IaCtaTt23742376All0.000454
ORF1ab/nsp3424T424IaCTaTA12376All0
ORF1ab/nsp3424T424IaCTaTC12376All0
ORF1ab/nsp3424T424IaCtaTt459460B.1.1.70.000411
ORF1ab/nsp3424T424IaCTaTA1460B.1.1.70.000001
ORF1ab/nsp3424T424IaCtaTt241241AY.40.000375
ORF1ab/nsp3424T424IaCtaTt161161B.10.001475
ORF1ab/nsp3424T424IaCtaTt119119B.1.617.20.000448
ORF1ab/nsp3424T424IaCtaTt100100B.1.1770.001317
ORF1ab/nsp3424T424IaCtaTt9192B.1.20.000801
ORF1ab/nsp3424T424IaCTaTC192B.1.20.000009
ORF1ab/nsp3424T424IaCtaTt7878B.1.10.001415
ORF1ab/nsp3424T424IaCtaTt6565AY.430.000288
ORF1ab/nsp3424T424IaCtaTt6161AY.250.000367
ORF1ab/nsp3424T424IaCtaTt5656AY.4.20.001215
ORF1ab/nsp3424T424IaCtaTt5454B.1.258.170.005614
ORF1ab/nsp3424T424IaCtaTt4444AY.1030.000273
ORF1ab/nsp3424T424IaCtaTt4343AY.440.000262
ORF1ab/nsp3424T424IaCtaTt4242B.1.4270.002121
ORF1ab/nsp3424T424IaCtaTt4040P.20.007465
ORF1ab/nsp3424T424IaCtaTt3939AY.1200.00145
ORF1ab/nsp3424T424IaCtaTt3636B.1.4290.000847
ORF1ab/nsp3424T424IaCtaTt2929B.1.1.4320.036709
ORF1ab/nsp3424T424IaCtaTt2828P.10.000441
ORF1ab/nsp3424T424IaCtaTt2525AY.1020.000663
ORF1ab/nsp3424T424IaCtaTt2525AY.46.60.001805
ORF1ab/nsp3424T424IaCtaTt2424AY.70.004704
ORF1ab/nsp3424T424IaCtaTt2323B.1.1.480.066092
ORF1ab/nsp3424T424IaCtaTt2121AY.200.000816
ORF1ab/nsp3424T424IaCtaTt2121AY.230.001465
ORF1ab/nsp3424T424IaCtaTt1818B.1.3510.000535
ORF1ab/nsp3424T424IaCtaTt1616AY.1190.000565
ORF1ab/nsp3424T424IaCtaTt1616AY.260.000453
ORF1ab/nsp3424T424IaCtaTt1515B.1.5260.000353
ORF1ab/nsp3424T424IaCtaTt1313AY.390.000321
ORF1ab/nsp3424T424IaCtaTt1313AY.60.000535
ORF1ab/nsp3424T424IaCtaTt1313B.1.1.630.005015
ORF1ab/nsp3424T424IaCtaTt1111AY.420.000443
ORF1ab/nsp3424T424IaCtaTt1010AY.30.000099
ORF1ab/nsp3424T424IaCtaTt1010AY.610.001048
ORF1ab/nsp3424T424IaCtaTt99B.1.1.5190.000357
ORF1ab/nsp3424T424IaCtaTt88AY.1000.000368
ORF1ab/nsp3424T424IaCtaTt88AY.50.000165
ORF1ab/nsp3424T424IaCtaTt77AY.470.000218
ORF1ab/nsp3424T424IaCtaTt77AY.750.000392
ORF1ab/nsp3424T424IaCtaTt66AY.1130.000854
ORF1ab/nsp3424T424IaCtaTt66AY.3.10.000512
ORF1ab/nsp3424T424IaCtaTt66AY.39.10.000238
ORF1ab/nsp3424T424IaCtaTt66B.1.177.180.006961
ORF1ab/nsp3424T424IaCtaTt66B.1.351.20.001815
ORF1ab/nsp3424T424IaCtaTt55AY.290.000079
ORF1ab/nsp3424T424IaCtaTt55B.1.1.4640.007364
ORF1ab/nsp3424T424IaCtaTt55B.1.1600.000156
ORF1ab/nsp3424T424IaCtaTt55B.1.177.190.007153
ORF1ab/nsp3424T424IaCtaTt44AY.1060.00134
ORF1ab/nsp3424T424IaCtaTt44AY.340.000388
ORF1ab/nsp3424T424IaCtaTt44AY.460.000416
ORF1ab/nsp3424T424IaCtaTt44AY.46.50.000794
ORF1ab/nsp3424T424IaCtaTt44AY.480.00186
ORF1ab/nsp3424T424IaCtaTt44AY.980.000316
ORF1ab/nsp3424T424IaCtaTt44AY.98.10.000194
ORF1ab/nsp3424T424IaCtaTt44B.1.1.330.001684
ORF1ab/nsp3424T424IaCtaTt44B.1.1.4310.064516
ORF1ab/nsp3424T424IaCtaTt44B.1.110.20.666667
ORF1ab/nsp3424T424IaCtaTt44B.1.360.000584
ORF1ab/nsp3424T424IaCtaTt44B.1.5170.001708
ORF1ab/nsp3424T424IaCtaTt44B.1.5250.000453
ORF1ab/nsp3424T424IaCtaTt44B.1.5610.001588
ORF1ab/nsp3424T424IaCtaTt33AY.16.10.00141
ORF1ab/nsp3424T424IaCtaTt33AY.190.003421
ORF1ab/nsp3424T424IaCtaTt33AY.330.0002
ORF1ab/nsp3424T424IaCtaTt33AY.5.30.001012
ORF1ab/nsp3424T424IaCtaTt33AY.630.001161
ORF1ab/nsp3424T424IaCtaTt33AY.740.000347
ORF1ab/nsp3424T424IaCtaTt33AY.90.000203
ORF1ab/nsp3424T424IaCtaTt33AY.920.000862
ORF1ab/nsp3424T424IaCtaTt33B0.000383
ORF1ab/nsp3424T424IaCtaTt33B.1.1.1890.004539
ORF1ab/nsp3424T424IaCtaTt33B.1.177.400.015464
ORF1ab/nsp3424T424IaCtaTt33B.1.177.570.000843
ORF1ab/nsp3424T424IaCtaTt33B.1.36.170.001482
ORF1ab/nsp3424T424IaCtaTt33B.1.5960.000261
ORF1ab/nsp3424T424IaCtaTt22AY.1160.000574
ORF1ab/nsp3424T424IaCtaTt22AY.120.2.10.000997
ORF1ab/nsp3424T424IaCtaTt22AY.320.001065
ORF1ab/nsp3424T424IaCtaTt22AY.350.000466
ORF1ab/nsp3424T424IaCtaTt22AY.450.000243
ORF1ab/nsp3424T424IaCtaTt22AY.530.000575
ORF1ab/nsp3424T424IaCtaTt22AY.580.001815
ORF1ab/nsp3424T424IaCtaTt22AY.670.000929
ORF1ab/nsp3424T424IaCtaTt22AY.75.10.000361
ORF1ab/nsp3424T424IaCtaTt22AY.9.2.10.003953
ORF1ab/nsp3424T424IaCtaTt22B.1.1.280.000622
ORF1ab/nsp3424T424IaCtaTt22B.1.2580.000133
ORF1ab/nsp3424T424IaCtaTt22B.1.36.290.001035
ORF1ab/nsp3424T424IaCtaTt22B.1.4280.002041
ORF1ab/nsp3424T424IaCtaTt22B.1.438.10.000215
ORF1ab/nsp3424T424IaCtaTt22B.1.5750.000607
ORF1ab/nsp3424T424IaCtaTt22B.1.6090.000959
ORF1ab/nsp3424T424IaCtaTt22B.1.6210.000177
ORF1ab/nsp3424T424IaCtaTt22D.20.00015
ORF1ab/nsp3424T424IaCtaTt22P.1.170.000324
ORF1ab/nsp3424T424IaCtaTt22P.30.00319
ORF1ab/nsp3424T424IaCtaTt22Q.80.00033
ORF1ab/nsp3424T424IaCtaTt11A.10.000282
ORF1ab/nsp3424T424IaCtaTt11A.23.10.000704
ORF1ab/nsp3424T424IaCtaTt11A.40.012821
ORF1ab/nsp3424T424IaCtaTt11AU.30.00211
ORF1ab/nsp3424T424IaCtaTt11AY.1050.000643
ORF1ab/nsp3424T424IaCtaTt11AY.1080.001103
ORF1ab/nsp3424T424IaCtaTt11AY.1090.00074
ORF1ab/nsp3424T424IaCtaTt11AY.1110.000183
ORF1ab/nsp3424T424IaCtaTt11AY.1140.000231
ORF1ab/nsp3424T424IaCtaTt11AY.1170.000085
ORF1ab/nsp3424T424IaCtaTt11AY.1180.000063
ORF1ab/nsp3424T424IaCtaTt11AY.1210.000135
ORF1ab/nsp3424T424IaCtaTt11AY.130.000161
ORF1ab/nsp3424T424IaCtaTt11AY.140.000088
ORF1ab/nsp3424T424IaCtaTt11AY.270.000065
ORF1ab/nsp3424T424IaCtaTt11AY.34.10.00051
ORF1ab/nsp3424T424IaCtaTt11AY.39.1.10.000725
ORF1ab/nsp3424T424IaCtaTt11AY.540.000095
ORF1ab/nsp3424T424IaCtaTt11AY.590.00053
ORF1ab/nsp3424T424IaCtaTt11AY.650.000533
ORF1ab/nsp3424T424IaCtaTt11AY.680.000274
ORF1ab/nsp3424T424IaCtaTt11AY.730.000665
ORF1ab/nsp3424T424IaCtaTt11AY.840.000437
ORF1ab/nsp3424T424IaCtaTt11AY.870.000833
ORF1ab/nsp3424T424IaCtaTt11AY.9.10.000084
ORF1ab/nsp3424T424IaCtaTt11B.1.1.1350.004695
ORF1ab/nsp3424T424IaCtaTt11B.1.1.1610.003534
ORF1ab/nsp3424T424IaCtaTt11B.1.1.2040.00304
ORF1ab/nsp3424T424IaCtaTt11B.1.1.2140.000055
ORF1ab/nsp3424T424IaCtaTt11B.1.1.260.005236
ORF1ab/nsp3424T424IaCtaTt11B.1.1.2840.000107
ORF1ab/nsp3424T424IaCtaTt11B.1.1.3060.000438
ORF1ab/nsp3424T424IaCtaTt11B.1.1.3080.011765
ORF1ab/nsp3424T424IaCtaTt11B.1.1.3180.000302
ORF1ab/nsp3424T424IaCtaTt11B.1.1.3480.000796
ORF1ab/nsp3424T424IaCtaTt11B.1.1.370.000193
ORF1ab/nsp3424T424IaCtaTt11B.1.1.3740.002375
ORF1ab/nsp3424T424IaCtaTt11B.1.1.390.00051
ORF1ab/nsp3424T424IaCtaTt11B.1.1.4160.000905
ORF1ab/nsp3424T424IaCtaTt11B.1.1.500.000679
ORF1ab/nsp3424T424IaCtaTt11B.1.1.700.000341
ORF1ab/nsp3424T424IaCtaTt11B.1.1130.015625
ORF1ab/nsp3424T424IaCtaTt11B.1.177.120.000152
ORF1ab/nsp3424T424IaCtaTt11B.1.177.210.000076
ORF1ab/nsp3424T424IaCtaTt11B.1.177.230.003236
ORF1ab/nsp3424T424IaCtaTt11B.1.177.350.000691
ORF1ab/nsp3424T424IaCtaTt11B.1.177.520.001757
ORF1ab/nsp3424T424IaCtaTt11B.1.177.560.000668
ORF1ab/nsp3424T424IaCtaTt11B.1.177.650.000665
ORF1ab/nsp3424T424IaCtaTt11B.1.177.730.000566
ORF1ab/nsp3424T424IaCtaTt11B.1.2060.000816
ORF1ab/nsp3424T424IaCtaTt11B.1.2100.002132
ORF1ab/nsp3424T424IaCtaTt11B.1.2340.000132
ORF1ab/nsp3424T424IaCtaTt11B.1.2400.000216
ORF1ab/nsp3424T424IaCtaTt11B.1.2430.00007
ORF1ab/nsp3424T424IaCtaTt11B.1.258.140.00098
ORF1ab/nsp3424T424IaCtaTt11B.1.3260.007576
ORF1ab/nsp3424T424IaCtaTt11B.1.3380.008621
ORF1ab/nsp3424T424IaCtaTt11B.1.3490.000715
ORF1ab/nsp3424T424IaCtaTt11B.1.36.160.001425
ORF1ab/nsp3424T424IaCtaTt11B.1.36.220.001208
ORF1ab/nsp3424T424IaCtaTt11B.1.36.390.002217
ORF1ab/nsp3424T424IaCtaTt11B.1.36.80.001
ORF1ab/nsp3424T424IaCtaTt11B.1.3610.001289
ORF1ab/nsp3424T424IaCtaTt11B.1.3890.001002
ORF1ab/nsp3424T424IaCtaTt11B.1.3960.000706
ORF1ab/nsp3424T424IaCtaTt11B.1.3990.001934
ORF1ab/nsp3424T424IaCtaTt11B.1.4000.000429
ORF1ab/nsp3424T424IaCtaTt11B.1.4590.004082
ORF1ab/nsp3424T424IaCtaTt11B.1.466.20.000391
ORF1ab/nsp3424T424IaCtaTt11B.1.5100.026316
ORF1ab/nsp3424T424IaCtaTt11B.1.5680.001111
ORF1ab/nsp3424T424IaCtaTt11B.1.5950.000261
ORF1ab/nsp3424T424IaCtaTt11B.1.619.10.000641
ORF1ab/nsp3424T424IaCtaTt11B.1.6270.00202
ORF1ab/nsp3424T424IaCtaTt11B.1.700.02439
ORF1ab/nsp3424T424IaCtaTt11B.1.90.006173
ORF1ab/nsp3424T424IaCtaTt11B.60.00091
ORF1ab/nsp3424T424IaCtaTt11C.370.000116
ORF1ab/nsp3424T424IaCtaTt11N.50.001767
ORF1ab/nsp3424T424IaCtaTt11P.1.140.000048
ORF1ab/nsp3424T424IaCtaTt11Q.10.000126
ORF1ab/nsp3424T424IaCtaTt11Q.40.000455