CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T350S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3350T350ST1168SnonsynActTct58280.4827593767-3769
ORF1ab/nsp3350T350ST1168SnonsynaCtaGt58160.2758623767-3769
ORF1ab/nsp3350T350ST1168SnonsynAcTTcC58130.2241383767-3769
ORF1ab/nsp3350T350ST1168SnonsynAcTTcA5810.01724143767-3769

Details of the mutation T350S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3350T350SActTct2858All0.000005
ORF1ab/nsp3350T350SaCtaGt1658All0.000003
ORF1ab/nsp3350T350SAcTTcC1358All0.000002
ORF1ab/nsp3350T350SAcTTcA158All0
ORF1ab/nsp3350T350SActTct2133P.10.000331
ORF1ab/nsp3350T350SAcTTcC1133P.10.000173
ORF1ab/nsp3350T350SaCtaGt133P.10.000016
ORF1ab/nsp3350T350SaCtaGt99AY.46.50.001786
ORF1ab/nsp3350T350SaCtaGt250.111111
ORF1ab/nsp3350T350SAcTTcA150.055556
ORF1ab/nsp3350T350SAcTTcC150.055556
ORF1ab/nsp3350T350SActTct150.055556
ORF1ab/nsp3350T350SAcTTcC12B.1.10.000018
ORF1ab/nsp3350T350SActTct12B.1.10.000018
ORF1ab/nsp3350T350SaCtaGt22B.1.1.70.000002
ORF1ab/nsp3350T350SActTct22P.1.170.000324
ORF1ab/nsp3350T350SaCtaGt11AY.1020.000027
ORF1ab/nsp3350T350SaCtaGt11AY.300.000396
ORF1ab/nsp3350T350SActTct11D.20.000075
ORF1ab/nsp3350T350SActTct11P.1.20.001156
ORF1ab/nsp3350T350SActTct11P.20.000187