CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1830del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31830T1830del1T2648del1delaCta-t320.6666678207-8209
ORF1ab/nsp31830T1830del1T2648del1delacTac-310.3333338207-8209

Details of the mutation T1830del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31830T1830del1aCta-t23All0
ORF1ab/nsp31830T1830del1acTac-13All0
ORF1ab/nsp31830T1830del1acTac-11B.1.10.000018
ORF1ab/nsp31830T1830del1aCta-t11B.1.5960.000087
ORF1ab/nsp31830T1830del1aCta-t11B.1.617.30.002985