CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1830I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31830T1830IT2648InonsynaCtaTt12917129160.9999238207-8209
ORF1ab/nsp31830T1830IT2648InonsynaCTaTA1291710.00007741748207-8209

Details of the mutation T1830I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31830T1830IaCtaTt1291612917All0.00247
ORF1ab/nsp31830T1830IaCTaTA112917All0
ORF1ab/nsp31830T1830IaCtaTt27132713AY.680.742677
ORF1ab/nsp31830T1830IaCtaTt22402240B.1.1.1760.984183
ORF1ab/nsp31830T1830IaCtaTt20322032B.1.1.70.001819
ORF1ab/nsp31830T1830IaCtaTt17231723AY.40.002682
ORF1ab/nsp31830T1830IaCtaTt927927B.1.1.3330.997847
ORF1ab/nsp31830T1830IaCtaTt366366B.1.617.20.001378
ORF1ab/nsp31830T1830IaCtaTt331331B.1.617.30.98806
ORF1ab/nsp31830T1830IaCtaTt272272AY.430.001205
ORF1ab/nsp31830T1830IaCtaTt209209B.10.001914
ORF1ab/nsp31830T1830IaCtaTt163163AY.440.000992
ORF1ab/nsp31830T1830IaCtaTt109109P.10.001717
ORF1ab/nsp31830T1830IaCtaTt105105B.1.20.000925
ORF1ab/nsp31830T1830IaCtaTt103103AY.1030.00064
ORF1ab/nsp31830T1830IaCtaTt7373AY.4.20.001583
ORF1ab/nsp31830T1830IaCtaTt7171AY.200.002759
ORF1ab/nsp31830T1830IaCtaTt5656B.1.4290.001318
ORF1ab/nsp31830T1830IaCtaTt5555AY.250.000331
ORF1ab/nsp31830T1830IaCtaTt5353B.1.1770.000698
ORF1ab/nsp31830T1830IaCtaTt5252AY.30.000517
ORF1ab/nsp31830T1830IaCtaTt5050B.1.3690.014261
ORF1ab/nsp31830T1830IaCtaTt4848B.1.10.000871
ORF1ab/nsp31830T1830IaCtaTt4848B.1.1600.001497
ORF1ab/nsp31830T1830IaCtaTt3737AY.1190.001306
ORF1ab/nsp31830T1830IaCtaTt3737B.1.2430.002575
ORF1ab/nsp31830T1830IaCtaTt3636AY.390.00089
ORF1ab/nsp31830T1830IaCtaTt3535B.1.1.5190.00139
ORF1ab/nsp31830T1830IaCtaTt3434AY.50.000702
ORF1ab/nsp31830T1830IaCtaTt3434B.1.3510.001011
ORF1ab/nsp31830T1830IaCtaTt3030B.1.5260.000705
ORF1ab/nsp31830T1830IaCtaTt2929AY.1200.001078
ORF1ab/nsp31830T1830IaCtaTt2828B.1.1.3120.053537
ORF1ab/nsp31830T1830IaCtaTt2121B.1.5820.010304
ORF1ab/nsp31830T1830IaCtaTt2020AY.660.02139
ORF1ab/nsp31830T1830IaCtaTt1818B.1.1.700.006139
ORF1ab/nsp31830T1830IaCtaTt1717AY.750.000952
ORF1ab/nsp31830T1830IaCtaTt1515AY.420.000603
ORF1ab/nsp31830T1830IaCtaTt1414AY.1020.000371
ORF1ab/nsp31830T1830IaCtaTt1414B.1.1.2140.000776
ORF1ab/nsp31830T1830IaCtaTt1414B.1.4090.010937
ORF1ab/nsp31830T1830IaCtaTt1414B.1.4270.000707
ORF1ab/nsp31830T1830IaCtaTt1414B.1.5960.00122
ORF1ab/nsp31830T1830IaCtaTt1414B.1.9.40.08589
ORF1ab/nsp31830T1830IaCtaTt1313AY.830.022414
ORF1ab/nsp31830T1830IaCtaTt1313Q.30.001885
ORF1ab/nsp31830T1830IaCtaTt1313Q.80.002144
ORF1ab/nsp31830T1830IaCtaTt1212AY.540.001144
ORF1ab/nsp31830T1830IaCtaTt1212B.1.1.4340.004183
ORF1ab/nsp31830T1830IaCtaTt1212B.1.3970.058252
ORF1ab/nsp31830T1830IaCtaTt1111B.1.1.40.032738
ORF1ab/nsp31830T1830IaCtaTt1111Q.10.00139
ORF1ab/nsp31830T1830IaCtaTt1010AY.46.50.001984
ORF1ab/nsp31830T1830IaCtaTt1010B.1.6210.000885
ORF1ab/nsp31830T1830IaCtaTt99AY.1180.000564
ORF1ab/nsp31830T1830IaCtaTt99AY.230.000628
ORF1ab/nsp31830T1830IaCtaTt99B.1.3460.011796
ORF1ab/nsp31830T1830IaCtaTt99C.370.001045
ORF1ab/nsp31830T1830IaCtaTt88AY.260.000226
ORF1ab/nsp31830T1830IaCtaTt88AY.46.60.000578
ORF1ab/nsp31830T1830IaCtaTt88B.1.1.280.00249
ORF1ab/nsp31830T1830IaCtaTt77AS.10.066667
ORF1ab/nsp31830T1830IaCtaTt77AY.1000.000322
ORF1ab/nsp31830T1830IaCtaTt77AY.290.00011
ORF1ab/nsp31830T1830IaCtaTt77AY.46.40.001152
ORF1ab/nsp31830T1830IaCtaTt77AY.470.000218
ORF1ab/nsp31830T1830IaCtaTt77B.1.1.2220.001428
ORF1ab/nsp31830T1830IaCtaTt77B.1.177.830.01037
ORF1ab/nsp31830T1830IaCtaTt77B.1.2870.212121
ORF1ab/nsp31830T1830IaCtaTt77B.1.5250.000792
ORF1ab/nsp31830T1830IaCtaTt77B.1.5950.001827
ORF1ab/nsp31830T1830IaCtaTt77B.1.621.10.003541
ORF1ab/nsp31830T1830IaCtaTt77D.20.000525
ORF1ab/nsp31830T1830IaCtaTt77P.1.120.003388
ORF1ab/nsp31830T1830IaCtaTt66AY.460.000624
ORF1ab/nsp31830T1830IaCtaTt66B.1.1.2630.009346
ORF1ab/nsp31830T1830IaCtaTt66B.1.1.3170.00247
ORF1ab/nsp31830T1830IaCtaTt66B.1.360.000875
ORF1ab/nsp31830T1830IaCtaTt66B.1.5760.00544
ORF1ab/nsp31830T1830IaCtaTt66B.1.617.10.000774
ORF1ab/nsp31830T1830IaCtaTt66B.1.6370.000438
ORF1ab/nsp31830T1830IaCtaTt55A.210.01385
ORF1ab/nsp31830T1830IaCtaTt55AY.1170.000423
ORF1ab/nsp31830T1830IaCtaTt55AY.3.10.000426
ORF1ab/nsp31830T1830IaCtaTt55AY.39.10.000198
ORF1ab/nsp31830T1830IaCtaTt55B.1.177.350.003455
ORF1ab/nsp31830T1830IaCtaTt44AY.1130.00057
ORF1ab/nsp31830T1830IaCtaTt44AY.140.000352
ORF1ab/nsp31830T1830IaCtaTt44AY.5.40.001107
ORF1ab/nsp31830T1830IaCtaTt44AY.510.003636
ORF1ab/nsp31830T1830IaCtaTt44AY.590.002119
ORF1ab/nsp31830T1830IaCtaTt44AY.9.20.000147
ORF1ab/nsp31830T1830IaCtaTt44AY.99.20.000369
ORF1ab/nsp31830T1830IaCtaTt44B.1.1.330.001684
ORF1ab/nsp31830T1830IaCtaTt44B.1.1470.003023
ORF1ab/nsp31830T1830IaCtaTt44B.1.177.820.001909
ORF1ab/nsp31830T1830IaCtaTt44B.1.177.860.000734
ORF1ab/nsp31830T1830IaCtaTt44B.1.2210.000284
ORF1ab/nsp31830T1830IaCtaTt44B.1.5170.001708
ORF1ab/nsp31830T1830IaCtaTt44B.1.6090.001918
ORF1ab/nsp31830T1830IaCtaTt44C.380.032258
ORF1ab/nsp31830T1830IaCtaTt44P.1.17.10.0035
ORF1ab/nsp31830T1830IaCtaTt33AY.1210.000406
ORF1ab/nsp31830T1830IaCtaTt33AY.130.000483
ORF1ab/nsp31830T1830IaCtaTt33AY.410.000882
ORF1ab/nsp31830T1830IaCtaTt33AY.46.10.00308
ORF1ab/nsp31830T1830IaCtaTt33AY.5.30.001012
ORF1ab/nsp31830T1830IaCtaTt33AY.530.000863
ORF1ab/nsp31830T1830IaCtaTt33AY.60.000123
ORF1ab/nsp31830T1830IaCtaTt33AY.850.001282
ORF1ab/nsp31830T1830IaCtaTt33B.1.1.4320.003797
ORF1ab/nsp31830T1830IaCtaTt33B.1.1.630.001157
ORF1ab/nsp31830T1830IaCtaTt33B.1.177.730.001699
ORF1ab/nsp31830T1830IaCtaTt33B.1.2980.006342
ORF1ab/nsp31830T1830IaCtaTt33B.1.4000.001287
ORF1ab/nsp31830T1830IaCtaTt33B.1.466.20.001174
ORF1ab/nsp31830T1830IaCtaTt33B.1.5640.001278
ORF1ab/nsp31830T1830IaCtaTt33B.1.5770.002062
ORF1ab/nsp31830T1830IaCtaTt33B.1.90.018519
ORF1ab/nsp31830T1830IaCtaTt33N.50.0053
ORF1ab/nsp31830T1830IaCtaTt33P.1.10.000953
ORF1ab/nsp31830T1830IaCtaTt33P.1.140.000143
ORF1ab/nsp31830T1830IaCtaTt33P.1.160.001122
ORF1ab/nsp31830T1830IaCtaTt22A.280.005291
ORF1ab/nsp31830T1830IaCtaTt22AD.20.000438
ORF1ab/nsp31830T1830IaCtaTt22AY.1010.000981
ORF1ab/nsp31830T1830IaCtaTt22AY.300.000791
ORF1ab/nsp31830T1830IaCtaTt22AY.4.50.000215
ORF1ab/nsp31830T1830IaCtaTt22AY.450.000243
ORF1ab/nsp31830T1830IaCtaTt22AY.610.00021
ORF1ab/nsp31830T1830IaCtaTt22AY.75.10.000361
ORF1ab/nsp31830T1830IaCtaTt22AY.910.001461
ORF1ab/nsp31830T1830IaCtaTt22AY.920.000575
ORF1ab/nsp31830T1830IaCtaTt22AY.98.10.000097
ORF1ab/nsp31830T1830IaCtaTt22AY.990.002099
ORF1ab/nsp31830T1830IaCtaTt22B.1.1.1280.014184
ORF1ab/nsp31830T1830IaCtaTt22B.1.1.2270.008696
ORF1ab/nsp31830T1830IaCtaTt22B.1.1.2650.006309
ORF1ab/nsp31830T1830IaCtaTt22B.1.1.2880.003831
ORF1ab/nsp31830T1830IaCtaTt22B.1.1.3510.005587
ORF1ab/nsp31830T1830IaCtaTt22B.1.1.4300.083333
ORF1ab/nsp31830T1830IaCtaTt22B.1.1.580.010753
ORF1ab/nsp31830T1830IaCtaTt22B.1.1.750.021277
ORF1ab/nsp31830T1830IaCtaTt22B.1.177.120.000303
ORF1ab/nsp31830T1830IaCtaTt22B.1.177.600.000437
ORF1ab/nsp31830T1830IaCtaTt22B.1.2340.000264
ORF1ab/nsp31830T1830IaCtaTt22B.1.258.170.000208
ORF1ab/nsp31830T1830IaCtaTt22B.1.2600.006689
ORF1ab/nsp31830T1830IaCtaTt22B.1.2650.002541
ORF1ab/nsp31830T1830IaCtaTt22B.1.3110.000549
ORF1ab/nsp31830T1830IaCtaTt22B.1.36.80.002
ORF1ab/nsp31830T1830IaCtaTt22B.1.3670.001585
ORF1ab/nsp31830T1830IaCtaTt22B.1.3850.021277
ORF1ab/nsp31830T1830IaCtaTt22B.1.3960.001411
ORF1ab/nsp31830T1830IaCtaTt22B.1.4160.002538
ORF1ab/nsp31830T1830IaCtaTt22B.1.4990.002101
ORF1ab/nsp31830T1830IaCtaTt22B.1.5880.00182
ORF1ab/nsp31830T1830IaCtaTt22B.1.6120.005305
ORF1ab/nsp31830T1830IaCtaTt22C.1.20.008511
ORF1ab/nsp31830T1830IaCtaTt22P.1.150.000465
ORF1ab/nsp31830T1830IaCtaTt22P.20.000373
ORF1ab/nsp31830T1830IaCtaTt11A0.000387
ORF1ab/nsp31830T1830IaCtaTt11A.10.000282
ORF1ab/nsp31830T1830IaCtaTt11A.23.10.000704
ORF1ab/nsp31830T1830IaCtaTt11A.50.001923
ORF1ab/nsp31830T1830IaCtaTt11AU.20.002421
ORF1ab/nsp31830T1830IaCtaTt11AU.30.00211
ORF1ab/nsp31830T1830IaCtaTt11AY.100.00053
ORF1ab/nsp31830T1830IaCtaTt11AY.1060.000335
ORF1ab/nsp31830T1830IaCtaTt11AY.1110.000183
ORF1ab/nsp31830T1830IaCtaTt11AY.120.20.001285
ORF1ab/nsp31830T1830IaCtaTt11AY.120.2.10.000498
ORF1ab/nsp31830T1830IaCtaTt11AY.23.10.000417
ORF1ab/nsp31830T1830IaCtaTt11AY.270.000065
ORF1ab/nsp31830T1830IaCtaTt11AY.29.10.000221
ORF1ab/nsp31830T1830IaCtaTt11AY.330.000067
ORF1ab/nsp31830T1830IaCtaTt11AY.34.10.00051
ORF1ab/nsp31830T1830IaCtaTt11AY.350.000233
ORF1ab/nsp31830T1830IaCtaTt11AY.360.000148
ORF1ab/nsp31830T1830IaCtaTt11AY.4.2.10.000149
ORF1ab/nsp31830T1830IaCtaTt11AY.480.000465
ORF1ab/nsp31830T1830IaCtaTt11AY.5.20.002463
ORF1ab/nsp31830T1830IaCtaTt11AY.570.000656
ORF1ab/nsp31830T1830IaCtaTt11AY.580.000907
ORF1ab/nsp31830T1830IaCtaTt11AY.7.10.000113
ORF1ab/nsp31830T1830IaCtaTt11AY.7.20.000559
ORF1ab/nsp31830T1830IaCtaTt11AY.700.000209
ORF1ab/nsp31830T1830IaCtaTt11AY.770.001127
ORF1ab/nsp31830T1830IaCtaTt11AY.860.00083
ORF1ab/nsp31830T1830IaCtaTt11AY.870.000833
ORF1ab/nsp31830T1830IaCtaTt11AY.90.000068
ORF1ab/nsp31830T1830IaCtaTt11AY.9.10.000084
ORF1ab/nsp31830T1830IaCtaTt11AY.980.000079
ORF1ab/nsp31830T1830IaCtaTt11AZ.20.000821
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.10.000327
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.100.001115
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.1390.022727
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.1570.000913
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.1700.001247
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.1920.002309
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.2160.00089
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.2180.007692
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.2190.005
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.250.000569
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.2770.000759
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.2910.000742
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.3480.000796
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.3500.04
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.3690.000446
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.390.00051
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.4040.015873
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.4200.001006
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.4530.008475
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.460.004367
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.710.006061
ORF1ab/nsp31830T1830IaCtaTt11B.1.1.740.00431
ORF1ab/nsp31830T1830IaCtaTt11B.1.160.70.002079
ORF1ab/nsp31830T1830IaCtaTt11B.1.177.150.000631
ORF1ab/nsp31830T1830IaCtaTt11B.1.177.20.004545
ORF1ab/nsp31830T1830IaCtaTt11B.1.177.210.000076
ORF1ab/nsp31830T1830IaCtaTt11B.1.177.420.000894
ORF1ab/nsp31830T1830IaCtaTt11B.1.177.60.000977
ORF1ab/nsp31830T1830IaCtaTt11B.1.177.790.002342
ORF1ab/nsp31830T1830IaCtaTt11B.1.177.810.000189
ORF1ab/nsp31830T1830IaCtaTt11B.1.177.880.012346
ORF1ab/nsp31830T1830IaCtaTt11B.1.214.20.0006
ORF1ab/nsp31830T1830IaCtaTt11B.1.2400.000216
ORF1ab/nsp31830T1830IaCtaTt11B.1.2580.000067
ORF1ab/nsp31830T1830IaCtaTt11B.1.258.110.000396
ORF1ab/nsp31830T1830IaCtaTt11B.1.258.140.00098
ORF1ab/nsp31830T1830IaCtaTt11B.1.2790.000514
ORF1ab/nsp31830T1830IaCtaTt11B.1.351.20.000303
ORF1ab/nsp31830T1830IaCtaTt11B.1.36.10.00114
ORF1ab/nsp31830T1830IaCtaTt11B.1.36.290.000517
ORF1ab/nsp31830T1830IaCtaTt11B.1.36.310.001751
ORF1ab/nsp31830T1830IaCtaTt11B.1.36.390.002217
ORF1ab/nsp31830T1830IaCtaTt11B.1.3990.001934
ORF1ab/nsp31830T1830IaCtaTt11B.1.4050.012346
ORF1ab/nsp31830T1830IaCtaTt11B.1.4280.00102
ORF1ab/nsp31830T1830IaCtaTt11B.1.428.20.033333
ORF1ab/nsp31830T1830IaCtaTt11B.1.438.10.000107
ORF1ab/nsp31830T1830IaCtaTt11B.1.4560.003268
ORF1ab/nsp31830T1830IaCtaTt11B.1.5400.009709
ORF1ab/nsp31830T1830IaCtaTt11B.1.5460.003704
ORF1ab/nsp31830T1830IaCtaTt11B.1.5670.003333
ORF1ab/nsp31830T1830IaCtaTt11B.1.5700.002941
ORF1ab/nsp31830T1830IaCtaTt11B.1.5750.000303
ORF1ab/nsp31830T1830IaCtaTt11B.1.5800.004065
ORF1ab/nsp31830T1830IaCtaTt11B.1.6190.000871
ORF1ab/nsp31830T1830IaCtaTt11B.1.690.035714
ORF1ab/nsp31830T1830IaCtaTt11B.1.760.011364
ORF1ab/nsp31830T1830IaCtaTt11B.110.005128
ORF1ab/nsp31830T1830IaCtaTt11B.200.023256
ORF1ab/nsp31830T1830IaCtaTt11B.390.002331
ORF1ab/nsp31830T1830IaCtaTt11B.400.000364
ORF1ab/nsp31830T1830IaCtaTt11B.60.00091
ORF1ab/nsp31830T1830IaCtaTt11C.140.004329
ORF1ab/nsp31830T1830IaCTaTA11C.350.000774
ORF1ab/nsp31830T1830IaCtaTt11C.360.000911
ORF1ab/nsp31830T1830IaCtaTt11C.36.3.10.002717
ORF1ab/nsp31830T1830IaCtaTt11L.10.001905
ORF1ab/nsp31830T1830IaCtaTt11N.90.005952
ORF1ab/nsp31830T1830IaCtaTt11P.1.170.000162
ORF1ab/nsp31830T1830IaCtaTt11P.1.40.000977
ORF1ab/nsp31830T1830IaCtaTt11P.1.70.000319
ORF1ab/nsp31830T1830IaCtaTt11R.10.00009