CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1639A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31639T1639AT2457AnonsynAcaGca43943917634-7636

Details of the mutation T1639A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31639T1639AAcaGca439439All0.000084
ORF1ab/nsp31639T1639AAcaGca9797B.1.3510.002883
ORF1ab/nsp31639T1639AAcaGca7373B.10.000669
ORF1ab/nsp31639T1639AAcaGca7070B.1.1.4480.142276
ORF1ab/nsp31639T1639AAcaGca6363C.10.150718
ORF1ab/nsp31639T1639AAcaGca4848B.1.1.520.585366
ORF1ab/nsp31639T1639AAcaGca2020B.1.3810.15625
ORF1ab/nsp31639T1639AAcaGca1414B.1.10.000254
ORF1ab/nsp31639T1639AAcaGca88B.1.1.1170.07767
ORF1ab/nsp31639T1639AAcaGca66B.1.1.10.00196
ORF1ab/nsp31639T1639AAcaGca55B.1.1.340.065789
ORF1ab/nsp31639T1639AAcaGca55B.1.1.570.057471
ORF1ab/nsp31639T1639AAcaGca44B.1.1.3860.266667
ORF1ab/nsp31639T1639AAcaGca44B.1.2370.0199
ORF1ab/nsp31639T1639AAcaGca44C.20.064516
ORF1ab/nsp31639T1639AAcaGca33B.1.1.530.041096
ORF1ab/nsp31639T1639AAcaGca22B.1.1.3720.001377
ORF1ab/nsp31639T1639AAcaGca22B.1.1.5070.017391
ORF1ab/nsp31639T1639AAcaGca22B.1.1.540.006042
ORF1ab/nsp31639T1639AAcaGca22C.90.060606
ORF1ab/nsp31639T1639AAcaGca11A0.000387
ORF1ab/nsp31639T1639AAcaGca11B.1.1.2530.002506
ORF1ab/nsp31639T1639AAcaGca11B.1.1.2540.011236
ORF1ab/nsp31639T1639AAcaGca11B.1.1.3070.002532
ORF1ab/nsp31639T1639AAcaGca11B.1.2430.00007
ORF1ab/nsp31639T1639AAcaGca11B.1.5240.001406
ORF1ab/nsp31639T1639AAcaGca11C.60.037037