CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1607del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31607T1607delT2425deldelACT---868617538-7540

Details of the mutation T1607del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31607T1607delACT---8686All0.000016
ORF1ab/nsp31607T1607delACT---3636B.1.1.70.000032
ORF1ab/nsp31607T1607delACT---88B.1.1770.000105
ORF1ab/nsp31607T1607delACT---55AY.40.000008
ORF1ab/nsp31607T1607delACT---33B.10.000027
ORF1ab/nsp31607T1607delACT---33B.1.10.000054
ORF1ab/nsp31607T1607delACT---22AY.250.000012
ORF1ab/nsp31607T1607delACT---22AY.430.000009
ORF1ab/nsp31607T1607delACT---22B.1.177.160.001329
ORF1ab/nsp31607T1607delACT---22B.1.177.540.001213
ORF1ab/nsp31607T1607delACT---11A0.000387
ORF1ab/nsp31607T1607delACT---11AY.240.000431
ORF1ab/nsp31607T1607delACT---11AY.4.50.000107
ORF1ab/nsp31607T1607delACT---11AY.46.20.000635
ORF1ab/nsp31607T1607delACT---11AY.60.000041
ORF1ab/nsp31607T1607delACT---11AY.660.00107
ORF1ab/nsp31607T1607delACT---11B.1.1.1590.004673
ORF1ab/nsp31607T1607delACT---11B.1.1.2320.001815
ORF1ab/nsp31607T1607delACT---11B.1.1.2360.006897
ORF1ab/nsp31607T1607delACT---11B.1.1.3060.000438
ORF1ab/nsp31607T1607delACT---11B.1.1.3110.000358
ORF1ab/nsp31607T1607delACT---11B.1.1.3150.008475
ORF1ab/nsp31607T1607delACT---11B.1.1.460.004367
ORF1ab/nsp31607T1607delACT---11B.1.1610.017241
ORF1ab/nsp31607T1607delACT---11B.1.177.190.001431
ORF1ab/nsp31607T1607delACT---11B.1.177.210.000076
ORF1ab/nsp31607T1607delACT---11B.1.177.510.004566
ORF1ab/nsp31607T1607delACT---11B.1.177.570.000281
ORF1ab/nsp31607T1607delACT---11B.1.177.810.000189
ORF1ab/nsp31607T1607delACT---11B.1.2580.000067
ORF1ab/nsp31607T1607delACT---11B.1.6210.000089
ORF1ab/nsp31607T1607delACT---11Q.10.000126
ORF1ab/nsp31607T1607delACT---11U.30.003861