CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1482T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31482T1482TT2300TsynacCacT821677220.9398737163-7165
ORF1ab/nsp31482T1482TT2300TsynacCacA82163430.04174787163-7165
ORF1ab/nsp31482T1482TT2300TsynacCacG82161510.01837887163-7165

Details of the mutation T1482T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31482T1482TacCacT77228216All0.001477
ORF1ab/nsp31482T1482TacCacA3438216All0.000066
ORF1ab/nsp31482T1482TacCacG1518216All0.000029
ORF1ab/nsp31482T1482TacCacT21532153B.1.617.10.277663
ORF1ab/nsp31482T1482TacCacT10531086B.1.1.70.000943
ORF1ab/nsp31482T1482TacCacA231086B.1.1.70.000021
ORF1ab/nsp31482T1482TacCacG101086B.1.1.70.000009
ORF1ab/nsp31482T1482TacCacT758795AY.40.00118
ORF1ab/nsp31482T1482TacCacA37795AY.40.000058
ORF1ab/nsp31482T1482TacCacT396397AY.390.009786
ORF1ab/nsp31482T1482TacCacA1397AY.390.000025
ORF1ab/nsp31482T1482TacCacT396396B.1.4290.009317
ORF1ab/nsp31482T1482TacCacT235262AY.430.001041
ORF1ab/nsp31482T1482TacCacG22262AY.430.000097
ORF1ab/nsp31482T1482TacCacA5262AY.430.000022
ORF1ab/nsp31482T1482TacCacT149220B.1.617.20.000561
ORF1ab/nsp31482T1482TacCacG54220B.1.617.20.000203
ORF1ab/nsp31482T1482TacCacA17220B.1.617.20.000064
ORF1ab/nsp31482T1482TacCacT204204B.1.2350.513854
ORF1ab/nsp31482T1482TacCacT141164AY.250.000848
ORF1ab/nsp31482T1482TacCacA23164AY.250.000138
ORF1ab/nsp31482T1482TacCacT137145B.1.20.001206
ORF1ab/nsp31482T1482TacCacA8145B.1.20.00007
ORF1ab/nsp31482T1482TacCacT126127AY.1030.000782
ORF1ab/nsp31482T1482TacCacA1127AY.1030.000006
ORF1ab/nsp31482T1482TacCacT101105B.10.000925
ORF1ab/nsp31482T1482TacCacA4105B.10.000037
ORF1ab/nsp31482T1482TacCacT4996AY.50.001012
ORF1ab/nsp31482T1482TacCacG4796AY.50.000971
ORF1ab/nsp31482T1482TacCacA8888AY.4.2.10.013111
ORF1ab/nsp31482T1482TacCacT8487P.10.001323
ORF1ab/nsp31482T1482TacCacA387P.10.000047
ORF1ab/nsp31482T1482TacCacT8080B.1.1.1530.087623
ORF1ab/nsp31482T1482TacCacT7777B.1.4270.003888
ORF1ab/nsp31482T1482TacCacT6466B.1.10.001161
ORF1ab/nsp31482T1482TacCacA266B.1.10.000036
ORF1ab/nsp31482T1482TacCacA6263AY.360.009189
ORF1ab/nsp31482T1482TacCacT163AY.360.000148
ORF1ab/nsp31482T1482TacCacT5859AY.440.000353
ORF1ab/nsp31482T1482TacCacA159AY.440.000006
ORF1ab/nsp31482T1482TacCacT5959AY.9.10.00494
ORF1ab/nsp31482T1482TacCacT5758B.1.1770.000751
ORF1ab/nsp31482T1482TacCacA158B.1.1770.000013
ORF1ab/nsp31482T1482TacCacT5555B.1.177.810.010413
ORF1ab/nsp31482T1482TacCacT5254AY.30.000517
ORF1ab/nsp31482T1482TacCacA254AY.30.00002
ORF1ab/nsp31482T1482TacCacT5050B.1.1.280.015562
ORF1ab/nsp31482T1482TacCacT4647B.1.1600.001435
ORF1ab/nsp31482T1482TacCacA147B.1.1600.000031
ORF1ab/nsp31482T1482TacCacT4445B.1.6370.003215
ORF1ab/nsp31482T1482TacCacA145B.1.6370.000073
ORF1ab/nsp31482T1482TacCacT4242AY.1020.001114
ORF1ab/nsp31482T1482TacCacT3737AY.1130.005268
ORF1ab/nsp31482T1482TacCacT3636B.1.1.700.012278
ORF1ab/nsp31482T1482TacCacT3135B.1.6210.002744
ORF1ab/nsp31482T1482TacCacG435B.1.6210.000354
ORF1ab/nsp31482T1482TacCacT3434B.1.1.2070.040189
ORF1ab/nsp31482T1482TacCacT2828B.1.2210.001989
ORF1ab/nsp31482T1482TacCacT2727AY.370.008534
ORF1ab/nsp31482T1482TacCacT2525B.1.2580.001664
ORF1ab/nsp31482T1482TacCacT2525B.1.2650.031766
ORF1ab/nsp31482T1482TacCacT2323B.1.1.3180.00694
ORF1ab/nsp31482T1482TacCacA1622AY.1190.000565
ORF1ab/nsp31482T1482TacCacT622AY.1190.000212
ORF1ab/nsp31482T1482TacCacT2122B.1.1.5190.000834
ORF1ab/nsp31482T1482TacCacA122B.1.1.5190.00004
ORF1ab/nsp31482T1482TacCacT2121B.1.5260.000494
ORF1ab/nsp31482T1482TacCacT1919B.1.160.310.153226
ORF1ab/nsp31482T1482TacCacT1818AY.140.001584
ORF1ab/nsp31482T1482TacCacT1718AY.260.000481
ORF1ab/nsp31482T1482TacCacA118AY.260.000028
ORF1ab/nsp31482T1482TacCacT1818B.1.3510.000535
ORF1ab/nsp31482T1482TacCacT1818C.36.30.01021
ORF1ab/nsp31482T1482TacCacT1717AY.290.000268
ORF1ab/nsp31482T1482TacCacT816B.1.5250.000905
ORF1ab/nsp31482T1482TacCacG816B.1.5250.000905
ORF1ab/nsp31482T1482TacCacT1515B.1.5750.004551
ORF1ab/nsp31482T1482TacCacT1414AY.230.000976
ORF1ab/nsp31482T1482TacCacT1013B.1.177.210.000765
ORF1ab/nsp31482T1482TacCacG313B.1.177.210.000229
ORF1ab/nsp31482T1482TacCacT1111AY.200.000428
ORF1ab/nsp31482T1482TacCacT1111AY.330.000735
ORF1ab/nsp31482T1482TacCacT1011AY.980.00079
ORF1ab/nsp31482T1482TacCacA111AY.980.000079
ORF1ab/nsp31482T1482TacCacT1111B.1.1.2430.044898
ORF1ab/nsp31482T1482TacCacT1111B.1.177.600.002403
ORF1ab/nsp31482T1482TacCacT1111B.1.36.170.005435
ORF1ab/nsp31482T1482TacCacT1111B.1.5820.005397
ORF1ab/nsp31482T1482TacCacT710AY.9.20.000257
ORF1ab/nsp31482T1482TacCacA310AY.9.20.00011
ORF1ab/nsp31482T1482TacCacT1010B.1.2430.000696
ORF1ab/nsp31482T1482TacCacT1010B.1.3690.002852
ORF1ab/nsp31482T1482TacCacT99AY.1200.000335
ORF1ab/nsp31482T1482TacCacT89AY.450.000973
ORF1ab/nsp31482T1482TacCacG19AY.450.000122
ORF1ab/nsp31482T1482TacCacT99AY.750.000504
ORF1ab/nsp31482T1482TacCacT99B.1.4280.009184
ORF1ab/nsp31482T1482TacCacT88B.1.177.860.001468
ORF1ab/nsp31482T1482TacCacT88P.50.109589
ORF1ab/nsp31482T1482TacCacT57AY.4.20.000108
ORF1ab/nsp31482T1482TacCacA27AY.4.20.000043
ORF1ab/nsp31482T1482TacCacT77B.1.360.001021
ORF1ab/nsp31482T1482TacCacT77C.370.000812
ORF1ab/nsp31482T1482TacCacT67D.20.00045
ORF1ab/nsp31482T1482TacCacA17D.20.000075
ORF1ab/nsp31482T1482TacCacT77P.1.170.001132
ORF1ab/nsp31482T1482TacCacT66A.23.10.004225
ORF1ab/nsp31482T1482TacCacT66AY.39.10.000238
ORF1ab/nsp31482T1482TacCacT66AY.470.000187
ORF1ab/nsp31482T1482TacCacT66AY.690.00112
ORF1ab/nsp31482T1482TacCacT66AY.90.000406
ORF1ab/nsp31482T1482TacCacA56B0.000639
ORF1ab/nsp31482T1482TacCacT16B0.000128
ORF1ab/nsp31482T1482TacCacT66B.1.1.3060.00263
ORF1ab/nsp31482T1482TacCacT56B.1.2340.00066
ORF1ab/nsp31482T1482TacCacA16B.1.2340.000132
ORF1ab/nsp31482T1482TacCacT66B.1.36.10.006842
ORF1ab/nsp31482T1482TacCacT66B.1.438.10.000644
ORF1ab/nsp31482T1482TacCacT66B.1.4990.006303
ORF1ab/nsp31482T1482TacCacT66B.1.5960.000523
ORF1ab/nsp31482T1482TacCacA66C.230.034884
ORF1ab/nsp31482T1482TacCacT55AY.1090.003698
ORF1ab/nsp31482T1482TacCacT55AY.3.10.000426
ORF1ab/nsp31482T1482TacCacT55AY.420.000201
ORF1ab/nsp31482T1482TacCacT55AY.99.20.000461
ORF1ab/nsp31482T1482TacCacT45B.1.1.2140.000222
ORF1ab/nsp31482T1482TacCacA15B.1.1.2140.000055
ORF1ab/nsp31482T1482TacCacT55B.1.1.2190.025
ORF1ab/nsp31482T1482TacCacT55B.1.1.3580.172414
ORF1ab/nsp31482T1482TacCacA55B.1.1.4340.001743
ORF1ab/nsp31482T1482TacCacT55B.1.110.30.003592
ORF1ab/nsp31482T1482TacCacT55B.1.3110.001373
ORF1ab/nsp31482T1482TacCacA55B.280.016393
ORF1ab/nsp31482T1482TacCacT55B.400.001821
ORF1ab/nsp31482T1482TacCacT55P.1.140.000239
ORF1ab/nsp31482T1482TacCacT44AY.1060.00134
ORF1ab/nsp31482T1482TacCacT44AY.1170.000338
ORF1ab/nsp31482T1482TacCacT44AY.1210.000541
ORF1ab/nsp31482T1482TacCacT44AY.160.001519
ORF1ab/nsp31482T1482TacCacT44AY.380.001997
ORF1ab/nsp31482T1482TacCacT44AY.46.60.000289
ORF1ab/nsp31482T1482TacCacT44B.1.1.150.054054
ORF1ab/nsp31482T1482TacCacT44B.1.1.2220.000816
ORF1ab/nsp31482T1482TacCacT44B.1.1.3170.001647
ORF1ab/nsp31482T1482TacCacT44B.1.1.4330.005698
ORF1ab/nsp31482T1482TacCacT44B.1.177.410.01
ORF1ab/nsp31482T1482TacCacT44B.1.2410.003247
ORF1ab/nsp31482T1482TacCacT44B.1.3400.017167
ORF1ab/nsp31482T1482TacCacT44B.1.36.290.002069
ORF1ab/nsp31482T1482TacCacT44B.1.3960.002823
ORF1ab/nsp31482T1482TacCacT44B.1.4220.003249
ORF1ab/nsp31482T1482TacCacT44B.1.4380.026144
ORF1ab/nsp31482T1482TacCacT44B.1.5950.001044
ORF1ab/nsp31482T1482TacCacT44R.10.00036
ORF1ab/nsp31482T1482TacCacT23AY.1000.000092
ORF1ab/nsp31482T1482TacCacA13AY.1000.000046
ORF1ab/nsp31482T1482TacCacT33AY.1140.000693
ORF1ab/nsp31482T1482TacCacT23AY.130.000322
ORF1ab/nsp31482T1482TacCacA13AY.130.000161
ORF1ab/nsp31482T1482TacCacT33AY.270.000194
ORF1ab/nsp31482T1482TacCacT33AY.320.001597
ORF1ab/nsp31482T1482TacCacT33AY.46.20.001906
ORF1ab/nsp31482T1482TacCacT33AY.5.30.001012
ORF1ab/nsp31482T1482TacCacT33AY.60.000123
ORF1ab/nsp31482T1482TacCacT33AY.610.000314
ORF1ab/nsp31482T1482TacCacT23AY.75.10.000361
ORF1ab/nsp31482T1482TacCacA13AY.75.10.00018
ORF1ab/nsp31482T1482TacCacT33AY.98.10.000145
ORF1ab/nsp31482T1482TacCacT33B.1.1.250.001706
ORF1ab/nsp31482T1482TacCacT33B.1.1.4290.013825
ORF1ab/nsp31482T1482TacCacT33B.1.1110.003525
ORF1ab/nsp31482T1482TacCacT33B.1.177.40.000633
ORF1ab/nsp31482T1482TacCacT33B.1.258.170.000312
ORF1ab/nsp31482T1482TacCacT33B.1.6090.001438
ORF1ab/nsp31482T1482TacCacT33P.1.150.000697
ORF1ab/nsp31482T1482TacCacT33P.20.00056
ORF1ab/nsp31482T1482TacCacT33Q.40.001364
ORF1ab/nsp31482T1482TacCacT33Q.80.000495
ORF1ab/nsp31482T1482TacCacT22A.50.003846
ORF1ab/nsp31482T1482TacCacT22AY.1180.000125
ORF1ab/nsp31482T1482TacCacG12AY.460.000104
ORF1ab/nsp31482T1482TacCacA12AY.460.000104
ORF1ab/nsp31482T1482TacCacT22AY.590.001059
ORF1ab/nsp31482T1482TacCacT22AY.670.000929
ORF1ab/nsp31482T1482TacCacT22AY.680.000547
ORF1ab/nsp31482T1482TacCacT22AY.7.20.001119
ORF1ab/nsp31482T1482TacCacT22AY.700.000417
ORF1ab/nsp31482T1482TacCacT22AY.730.001331
ORF1ab/nsp31482T1482TacCacT22AZ.60.016807
ORF1ab/nsp31482T1482TacCacT22B.1.1.10.000653
ORF1ab/nsp31482T1482TacCacT22B.1.1.2730.013514
ORF1ab/nsp31482T1482TacCacT22B.1.1.370.000386
ORF1ab/nsp31482T1482TacCacT22B.1.1.390.001019
ORF1ab/nsp31482T1482TacCacT22B.1.1.5170.013605
ORF1ab/nsp31482T1482TacCacT22B.1.1.5280.009615
ORF1ab/nsp31482T1482TacCacT22B.1.1.630.000772
ORF1ab/nsp31482T1482TacCacA12B.1.177.730.000566
ORF1ab/nsp31482T1482TacCacT12B.1.177.730.000566
ORF1ab/nsp31482T1482TacCacT22B.1.2140.007326
ORF1ab/nsp31482T1482TacCacT22B.1.351.20.000605
ORF1ab/nsp31482T1482TacCacT22B.1.351.50.001199
ORF1ab/nsp31482T1482TacCacT22B.1.3990.003868
ORF1ab/nsp31482T1482TacCacT22B.1.4040.002604
ORF1ab/nsp31482T1482TacCacT22B.1.4480.005249
ORF1ab/nsp31482T1482TacCacT22B.1.4590.008163
ORF1ab/nsp31482T1482TacCacT22B.1.466.20.000782
ORF1ab/nsp31482T1482TacCacT22B.1.5090.001732
ORF1ab/nsp31482T1482TacCacT22B.1.5170.000854
ORF1ab/nsp31482T1482TacCacT12B.1.5640.000426
ORF1ab/nsp31482T1482TacCacA12B.1.5640.000426
ORF1ab/nsp31482T1482TacCacT22B.1.6190.001742
ORF1ab/nsp31482T1482TacCacT22P.1.70.000639
ORF1ab/nsp31482T1482TacCacA12P.40.003802
ORF1ab/nsp31482T1482TacCacT12P.40.003802
ORF1ab/nsp31482T1482TacCacT22Q.20.001227
ORF1ab/nsp31482T1482TacCacT22Q.30.00029
ORF1ab/nsp31482T1482TacCacT110.055556
ORF1ab/nsp31482T1482TacCacT11A0.000387
ORF1ab/nsp31482T1482TacCacT11A.2.50.000499
ORF1ab/nsp31482T1482TacCacT11AM.40.003571
ORF1ab/nsp31482T1482TacCacT11AU.30.00211
ORF1ab/nsp31482T1482TacCacT11AY.1010.00049
ORF1ab/nsp31482T1482TacCacT11AY.116.10.000311
ORF1ab/nsp31482T1482TacCacT11AY.16.10.00047
ORF1ab/nsp31482T1482TacCacT11AY.23.10.000417
ORF1ab/nsp31482T1482TacCacT11AY.340.000097
ORF1ab/nsp31482T1482TacCacT11AY.350.000233
ORF1ab/nsp31482T1482TacCacT11AY.39.20.001541
ORF1ab/nsp31482T1482TacCacA11AY.4.30.000842
ORF1ab/nsp31482T1482TacCacG11AY.4.40.000409
ORF1ab/nsp31482T1482TacCacT11AY.4.50.000107
ORF1ab/nsp31482T1482TacCacT11AY.46.10.001027
ORF1ab/nsp31482T1482TacCacT11AY.530.000288
ORF1ab/nsp31482T1482TacCacT11AY.540.000095
ORF1ab/nsp31482T1482TacCacT11AY.620.000436
ORF1ab/nsp31482T1482TacCacA11AY.640.000595
ORF1ab/nsp31482T1482TacCacT11AY.770.001127
ORF1ab/nsp31482T1482TacCacA11AY.790.001211
ORF1ab/nsp31482T1482TacCacA11AY.840.000437
ORF1ab/nsp31482T1482TacCacT11AY.910.00073
ORF1ab/nsp31482T1482TacCacT11B.1.1.1440.028571
ORF1ab/nsp31482T1482TacCacT11B.1.1.1760.000439
ORF1ab/nsp31482T1482TacCacT11B.1.1.1940.00495
ORF1ab/nsp31482T1482TacCacT11B.1.1.2000.007463
ORF1ab/nsp31482T1482TacCacT11B.1.1.2160.00089
ORF1ab/nsp31482T1482TacCacT11B.1.1.2280.003049
ORF1ab/nsp31482T1482TacCacT11B.1.1.2360.006897
ORF1ab/nsp31482T1482TacCacA11B.1.1.2630.001558
ORF1ab/nsp31482T1482TacCacT11B.1.1.270.00565
ORF1ab/nsp31482T1482TacCacT11B.1.1.2770.000759
ORF1ab/nsp31482T1482TacCacT11B.1.1.3110.000358
ORF1ab/nsp31482T1482TacCacT11B.1.1.3220.008772
ORF1ab/nsp31482T1482TacCacT11B.1.1.330.000421
ORF1ab/nsp31482T1482TacCacT11B.1.1.3540.004386
ORF1ab/nsp31482T1482TacCacT11B.1.1.3620.005618
ORF1ab/nsp31482T1482TacCacT11B.1.1.3690.000446
ORF1ab/nsp31482T1482TacCacT11B.1.1.3980.003226
ORF1ab/nsp31482T1482TacCacT11B.1.1.4200.001006
ORF1ab/nsp31482T1482TacCacT11B.1.1.4320.001266
ORF1ab/nsp31482T1482TacCacT11B.1.1.4480.002033
ORF1ab/nsp31482T1482TacCacT11B.1.1.4530.008475
ORF1ab/nsp31482T1482TacCacT11B.1.1.5230.001563
ORF1ab/nsp31482T1482TacCacT11B.1.1.80.003584
ORF1ab/nsp31482T1482TacCacA11B.1.1700.00431
ORF1ab/nsp31482T1482TacCacT11B.1.177.170.000821
ORF1ab/nsp31482T1482TacCacT11B.1.177.420.000894
ORF1ab/nsp31482T1482TacCacT11B.1.177.430.001477
ORF1ab/nsp31482T1482TacCacT11B.1.177.440.000519
ORF1ab/nsp31482T1482TacCacT11B.1.177.500.004695
ORF1ab/nsp31482T1482TacCacT11B.1.177.560.000668
ORF1ab/nsp31482T1482TacCacT11B.1.177.620.001192
ORF1ab/nsp31482T1482TacCacT11B.1.177.750.001041
ORF1ab/nsp31482T1482TacCacT11B.1.177.80.000752
ORF1ab/nsp31482T1482TacCacT11B.1.177.870.000728
ORF1ab/nsp31482T1482TacCacT11B.1.1990.004132
ORF1ab/nsp31482T1482TacCacT11B.1.214.20.0006
ORF1ab/nsp31482T1482TacCacT11B.1.2390.001221
ORF1ab/nsp31482T1482TacCacT11B.1.258.160.001637
ORF1ab/nsp31482T1482TacCacT11B.1.2790.000514
ORF1ab/nsp31482T1482TacCacT11B.1.2930.0125
ORF1ab/nsp31482T1482TacCacT11B.1.30.002618
ORF1ab/nsp31482T1482TacCacT11B.1.36.210.00216
ORF1ab/nsp31482T1482TacCacT11B.1.36.80.001
ORF1ab/nsp31482T1482TacCacT11B.1.3750.00082
ORF1ab/nsp31482T1482TacCacT11B.1.3950.007042
ORF1ab/nsp31482T1482TacCacT11B.1.4000.000429
ORF1ab/nsp31482T1482TacCacT11B.1.4090.000781
ORF1ab/nsp31482T1482TacCacT11B.1.4680.005714
ORF1ab/nsp31482T1482TacCacA11B.1.4920.007042
ORF1ab/nsp31482T1482TacCacT11B.1.4950.009091
ORF1ab/nsp31482T1482TacCacT11B.1.5480.035714
ORF1ab/nsp31482T1482TacCacT11B.1.5760.000907
ORF1ab/nsp31482T1482TacCacT11B.1.5910.010638
ORF1ab/nsp31482T1482TacCacT11B.1.6120.002653
ORF1ab/nsp31482T1482TacCacT11B.1.619.10.000641
ORF1ab/nsp31482T1482TacCacT11B.4.10.018868
ORF1ab/nsp31482T1482TacCacT11C.160.00106
ORF1ab/nsp31482T1482TacCacT11C.300.001727
ORF1ab/nsp31482T1482TacCacT11C.320.023256
ORF1ab/nsp31482T1482TacCacT11C.400.027778
ORF1ab/nsp31482T1482TacCacT11C.60.037037
ORF1ab/nsp31482T1482TacCacT11D.50.004975
ORF1ab/nsp31482T1482TacCacT11N.50.001767
ORF1ab/nsp31482T1482TacCacT11P.1.10.000318
ORF1ab/nsp31482T1482TacCacA11P.1.120.000484
ORF1ab/nsp31482T1482TacCacT11P.1.20.001156
ORF1ab/nsp31482T1482TacCacT11Q.10.000126