CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1465del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31465T1465del2T2283del2delaCTa--640.6666677112-7114
ORF1ab/nsp31465T1465del2T2283del2delACT--C610.1666677112-7114
ORF1ab/nsp31465T1465del2T2283del2delACTG--610.1666677112-7114

Details of the mutation T1465del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31465T1465del2aCTa--46All0.000001
ORF1ab/nsp31465T1465del2ACT--C16All0
ORF1ab/nsp31465T1465del2ACTG--16All0
ORF1ab/nsp31465T1465del2aCTa--22B.1.1.70.000002
ORF1ab/nsp31465T1465del2aCTa--12B.1.617.20.000004
ORF1ab/nsp31465T1465del2ACT--C12B.1.617.20.000004
ORF1ab/nsp31465T1465del2ACTG--11AY.670.000464
ORF1ab/nsp31465T1465del2aCTa--11B.1.1.1920.002309