CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1465L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31465T1465LT2283LnonsynACtCTt740.5714297112-7114
ORF1ab/nsp31465T1465LT2283LnonsynACTCTC730.4285717112-7114

Details of the mutation T1465L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31465T1465LACtCTt47All0.000001
ORF1ab/nsp31465T1465LACTCTC37All0.000001
ORF1ab/nsp31465T1465LACtCTt23B.1.617.20.000008
ORF1ab/nsp31465T1465LACTCTC13B.1.617.20.000004
ORF1ab/nsp31465T1465LACtCTt12AY.1130.000142
ORF1ab/nsp31465T1465LACTCTC12AY.1130.000142
ORF1ab/nsp31465T1465LACTCTC11AY.430.000004
ORF1ab/nsp31465T1465LACtCTt11AY.9.20.000037