CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1465I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31465T1465IT2283InonsynaCtaTt787378710.9997467112-7114
ORF1ab/nsp31465T1465IT2283InonsynaCTaTC787320.0002540337112-7114

Details of the mutation T1465I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31465T1465IaCtaTt78717873All0.001505
ORF1ab/nsp31465T1465IaCTaTC27873All0
ORF1ab/nsp31465T1465IaCtaTt23462346AY.40.003651
ORF1ab/nsp31465T1465IaCtaTt18141814B.1.1.70.001624
ORF1ab/nsp31465T1465IaCtaTt331331B.1.20.002915
ORF1ab/nsp31465T1465IaCtaTt320321B.1.617.20.001205
ORF1ab/nsp31465T1465IaCTaTC1321B.1.617.20.000004
ORF1ab/nsp31465T1465IaCtaTt244244AY.30.002427
ORF1ab/nsp31465T1465IaCtaTt204204B.1.2430.014195
ORF1ab/nsp31465T1465IaCtaTt155155P.10.002442
ORF1ab/nsp31465T1465IaCtaTt154154AY.430.000682
ORF1ab/nsp31465T1465IaCtaTt127127AY.440.000773
ORF1ab/nsp31465T1465IaCtaTt116116AY.250.000698
ORF1ab/nsp31465T1465IaCtaTt116116B.1.6340.39726
ORF1ab/nsp31465T1465IaCtaTt8989B.1.3510.002646
ORF1ab/nsp31465T1465IaCtaTt8181B.1.10.001469
ORF1ab/nsp31465T1465IaCtaTt7070AY.1030.000435
ORF1ab/nsp31465T1465IaCtaTt6464B.1.1770.000843
ORF1ab/nsp31465T1465IaCtaTt5858B.1.1.3110.020774
ORF1ab/nsp31465T1465IaCtaTt5858B.1.177.320.078273
ORF1ab/nsp31465T1465IaCtaTt5555AY.1020.001458
ORF1ab/nsp31465T1465IaCtaTt4949AY.390.001211
ORF1ab/nsp31465T1465IaCtaTt4949B.10.000449
ORF1ab/nsp31465T1465IaCtaTt4646AY.260.001302
ORF1ab/nsp31465T1465IaCtaTt4040P.1.170.00647
ORF1ab/nsp31465T1465IaCtaTt3939B.1.360.00569
ORF1ab/nsp31465T1465IaCtaTt3838B.1.5260.000893
ORF1ab/nsp31465T1465IaCtaTt3333B.1.177.600.007208
ORF1ab/nsp31465T1465IaCtaTt3232B.1.5960.002788
ORF1ab/nsp31465T1465IaCtaTt2929AY.330.001937
ORF1ab/nsp31465T1465IaCtaTt2727AY.200.001049
ORF1ab/nsp31465T1465IaCtaTt2727AY.50.000558
ORF1ab/nsp31465T1465IaCtaTt2323A.2.50.011477
ORF1ab/nsp31465T1465IaCtaTt2323B.1.2320.012359
ORF1ab/nsp31465T1465IaCtaTt2222C.390.415094
ORF1ab/nsp31465T1465IaCtaTt2222D.20.001651
ORF1ab/nsp31465T1465IaCtaTt2121B.1.110.30.015086
ORF1ab/nsp31465T1465IaCtaTt2121B.1.4270.00106
ORF1ab/nsp31465T1465IaCtaTt1919AY.290.0003
ORF1ab/nsp31465T1465IaCtaTt1919B.1.1.700.00648
ORF1ab/nsp31465T1465IaCtaTt1717B.1.1.5190.000675
ORF1ab/nsp31465T1465IaCtaTt1515AY.1000.00069
ORF1ab/nsp31465T1465IaCtaTt1515AY.1200.000558
ORF1ab/nsp31465T1465IaCtaTt1515AY.230.001046
ORF1ab/nsp31465T1465IaCtaTt1515AY.980.001185
ORF1ab/nsp31465T1465IaCtaTt1414AY.140.001232
ORF1ab/nsp31465T1465IaCtaTt1414R.10.00126
ORF1ab/nsp31465T1465IaCtaTt1313AY.1180.000814
ORF1ab/nsp31465T1465IaCtaTt1313AY.1190.000459
ORF1ab/nsp31465T1465IaCtaTt1313AY.340.001261
ORF1ab/nsp31465T1465IaCtaTt1313AY.610.001362
ORF1ab/nsp31465T1465IaCtaTt1313AY.98.10.00063
ORF1ab/nsp31465T1465IaCtaTt1313B.1.2580.000865
ORF1ab/nsp31465T1465IaCtaTt1313B.1.6100.046099
ORF1ab/nsp31465T1465IaCtaTt1313C.370.001509
ORF1ab/nsp31465T1465IaCtaTt1212AY.470.000373
ORF1ab/nsp31465T1465IaCtaTt1212AY.540.001144
ORF1ab/nsp31465T1465IaCtaTt1212P.1.140.000574
ORF1ab/nsp31465T1465IaCtaTt1111B.1.4000.004719
ORF1ab/nsp31465T1465IaCtaTt1010AY.4.20.000217
ORF1ab/nsp31465T1465IaCtaTt1010AY.60.000411
ORF1ab/nsp31465T1465IaCtaTt1010B.1.617.10.00129
ORF1ab/nsp31465T1465IaCtaTt99A.2.5.10.043269
ORF1ab/nsp31465T1465IaCtaTt99AY.1210.001218
ORF1ab/nsp31465T1465IaCtaTt99AY.29.10.001985
ORF1ab/nsp31465T1465IaCtaTt99AY.5.30.003036
ORF1ab/nsp31465T1465IaCtaTt99AY.75.10.001623
ORF1ab/nsp31465T1465IaCtaTt99AZ.2.10.073171
ORF1ab/nsp31465T1465IaCtaTt99B.1.1.370.001736
ORF1ab/nsp31465T1465IaCtaTt99B.1.2210.000639
ORF1ab/nsp31465T1465IaCtaTt99C.160.009544
ORF1ab/nsp31465T1465IaCtaTt88AY.39.10.000317
ORF1ab/nsp31465T1465IaCtaTt88AY.420.000322
ORF1ab/nsp31465T1465IaCtaTt88B.1.1.2650.025237
ORF1ab/nsp31465T1465IaCtaTt88B.1.1.3050.030888
ORF1ab/nsp31465T1465IaCtaTt88B.1.1.3160.007401
ORF1ab/nsp31465T1465IaCtaTt88B.1.575.10.019512
ORF1ab/nsp31465T1465IaCtaTt88B.1.6210.000708
ORF1ab/nsp31465T1465IaCtaTt77B.1.177.580.009321
ORF1ab/nsp31465T1465IaCtaTt77Q.10.000884
ORF1ab/nsp31465T1465IaCtaTt66AY.190.006842
ORF1ab/nsp31465T1465IaCtaTt66AY.770.006764
ORF1ab/nsp31465T1465IaCtaTt66AY.99.20.000553
ORF1ab/nsp31465T1465IaCtaTt66B.1.1.2140.000333
ORF1ab/nsp31465T1465IaCtaTt66B.1.1.630.002315
ORF1ab/nsp31465T1465IaCtaTt66B.1.1600.000187
ORF1ab/nsp31465T1465IaCtaTt66B.1.3110.001647
ORF1ab/nsp31465T1465IaCtaTt66B.1.4290.000141
ORF1ab/nsp31465T1465IaCtaTt66B.1.466.20.002347
ORF1ab/nsp31465T1465IaCtaTt66B.1.5610.002382
ORF1ab/nsp31465T1465IaCtaTt66B.1.6090.002876
ORF1ab/nsp31465T1465IaCtaTt66N.50.010601
ORF1ab/nsp31465T1465IaCtaTt66P.1.70.001916
ORF1ab/nsp31465T1465IaCtaTt55A.300.714286
ORF1ab/nsp31465T1465IaCtaTt55AY.350.001165
ORF1ab/nsp31465T1465IaCtaTt55AY.480.002326
ORF1ab/nsp31465T1465IaCtaTt55AY.750.00028
ORF1ab/nsp31465T1465IaCtaTt55AY.870.004163
ORF1ab/nsp31465T1465IaCtaTt55AY.90.000338
ORF1ab/nsp31465T1465IaCtaTt55B.1.1.3060.002192
ORF1ab/nsp31465T1465IaCtaTt55B.1.1.3170.002058
ORF1ab/nsp31465T1465IaCtaTt55B.1.2410.004058
ORF1ab/nsp31465T1465IaCtaTt55B.1.258.170.00052
ORF1ab/nsp31465T1465IaCtaTt55B.1.595.30.131579
ORF1ab/nsp31465T1465IaCtaTt55C.360.004554
ORF1ab/nsp31465T1465IaCtaTt55P.1.10.001588
ORF1ab/nsp31465T1465IaCtaTt55P.1.150.001162
ORF1ab/nsp31465T1465IaCtaTt55P.20.000933
ORF1ab/nsp31465T1465IaCtaTt55Q.80.000825
ORF1ab/nsp31465T1465IaCtaTt55Z.10.014451
ORF1ab/nsp31465T1465IaCtaTt44AY.450.000487
ORF1ab/nsp31465T1465IaCtaTt44AY.670.001857
ORF1ab/nsp31465T1465IaCtaTt44AY.9.10.000335
ORF1ab/nsp31465T1465IaCtaTt44B.1.1.250.002274
ORF1ab/nsp31465T1465IaCtaTt44B.1.1.2660.04878
ORF1ab/nsp31465T1465IaCtaTt44B.1.177.540.002426
ORF1ab/nsp31465T1465IaCtaTt44B.1.36.290.002069
ORF1ab/nsp31465T1465IaCtaTt44B.1.5250.000453
ORF1ab/nsp31465T1465IaCtaTt44P.40.015209
ORF1ab/nsp31465T1465IaCtaTt33AY.1060.001005
ORF1ab/nsp31465T1465IaCtaTt33AY.1170.000254
ORF1ab/nsp31465T1465IaCtaTt33AY.460.000312
ORF1ab/nsp31465T1465IaCtaTt33AY.46.50.000595
ORF1ab/nsp31465T1465IaCtaTt33AY.800.003386
ORF1ab/nsp31465T1465IaCtaTt33AY.840.001312
ORF1ab/nsp31465T1465IaCtaTt33B.1.1.10.00098
ORF1ab/nsp31465T1465IaCtaTt33B.1.1.1710.011029
ORF1ab/nsp31465T1465IaCtaTt33B.1.1.280.000934
ORF1ab/nsp31465T1465IaCtaTt33B.1.1.3120.005736
ORF1ab/nsp31465T1465IaCtaTt33B.1.1.390.001529
ORF1ab/nsp31465T1465IaCtaTt33B.1.177.440.001557
ORF1ab/nsp31465T1465IaCtaTt33B.1.177.810.000568
ORF1ab/nsp31465T1465IaCtaTt33B.1.2340.000396
ORF1ab/nsp31465T1465IaCtaTt33B.1.2350.007557
ORF1ab/nsp31465T1465IaCtaTt33B.1.3620.004622
ORF1ab/nsp31465T1465IaCtaTt33B.1.416.10.004687
ORF1ab/nsp31465T1465IaCtaTt33B.1.5640.001278
ORF1ab/nsp31465T1465IaCtaTt33P.1.160.001122
ORF1ab/nsp31465T1465IaCtaTt22A.10.000564
ORF1ab/nsp31465T1465IaCtaTt12AY.1130.000142
ORF1ab/nsp31465T1465IaCTaTC12AY.1130.000142
ORF1ab/nsp31465T1465IaCtaTt22AY.1160.000574
ORF1ab/nsp31465T1465IaCtaTt22AY.160.000759
ORF1ab/nsp31465T1465IaCtaTt22AY.3.10.000171
ORF1ab/nsp31465T1465IaCtaTt22AY.4.2.10.000298
ORF1ab/nsp31465T1465IaCtaTt22AY.4.50.000215
ORF1ab/nsp31465T1465IaCtaTt22AY.46.20.001271
ORF1ab/nsp31465T1465IaCtaTt22AY.550.001835
ORF1ab/nsp31465T1465IaCtaTt22AY.630.000774
ORF1ab/nsp31465T1465IaCtaTt22AY.680.000547
ORF1ab/nsp31465T1465IaCtaTt22AY.820.002714
ORF1ab/nsp31465T1465IaCtaTt22AY.860.00166
ORF1ab/nsp31465T1465IaCtaTt22AY.9.20.000073
ORF1ab/nsp31465T1465IaCtaTt22AY.940.000885
ORF1ab/nsp31465T1465IaCtaTt22AY.990.002099
ORF1ab/nsp31465T1465IaCtaTt22B.1.1.2160.001781
ORF1ab/nsp31465T1465IaCtaTt22B.1.1.2200.003717
ORF1ab/nsp31465T1465IaCtaTt22B.1.1.3010.002358
ORF1ab/nsp31465T1465IaCtaTt22B.1.1.3180.000604
ORF1ab/nsp31465T1465IaCtaTt22B.1.1.3480.001592
ORF1ab/nsp31465T1465IaCtaTt22B.1.1.950.039216
ORF1ab/nsp31465T1465IaCtaTt22B.1.1.980.037037
ORF1ab/nsp31465T1465IaCtaTt22B.1.177.560.001335
ORF1ab/nsp31465T1465IaCtaTt22B.1.177.860.000367
ORF1ab/nsp31465T1465IaCtaTt22B.1.1990.008264
ORF1ab/nsp31465T1465IaCtaTt22B.1.2010.011364
ORF1ab/nsp31465T1465IaCtaTt22B.1.2220.003384
ORF1ab/nsp31465T1465IaCtaTt22B.1.2400.000431
ORF1ab/nsp31465T1465IaCtaTt22B.1.3060.011429
ORF1ab/nsp31465T1465IaCtaTt22B.1.351.20.000605
ORF1ab/nsp31465T1465IaCtaTt22B.1.36.220.002415
ORF1ab/nsp31465T1465IaCtaTt22B.1.3710.002245
ORF1ab/nsp31465T1465IaCtaTt22B.1.3780.013699
ORF1ab/nsp31465T1465IaCtaTt22B.1.4590.008163
ORF1ab/nsp31465T1465IaCtaTt22B.1.5750.000607
ORF1ab/nsp31465T1465IaCtaTt22B.1.5760.001813
ORF1ab/nsp31465T1465IaCtaTt22B.1.5950.000522
ORF1ab/nsp31465T1465IaCtaTt22B.1.6050.011905
ORF1ab/nsp31465T1465IaCtaTt22B.1.6190.001742
ORF1ab/nsp31465T1465IaCtaTt22C.36.30.001134
ORF1ab/nsp31465T1465IaCtaTt22N.30.011628
ORF1ab/nsp31465T1465IaCtaTt22P.30.00319
ORF1ab/nsp31465T1465IaCtaTt22Q.30.00029
ORF1ab/nsp31465T1465IaCtaTt11A.2.20.001689
ORF1ab/nsp31465T1465IaCtaTt11A.290.005319
ORF1ab/nsp31465T1465IaCtaTt11AY.100.00053
ORF1ab/nsp31465T1465IaCtaTt11AY.1010.00049
ORF1ab/nsp31465T1465IaCtaTt11AY.1100.000113
ORF1ab/nsp31465T1465IaCtaTt11AY.1140.000231
ORF1ab/nsp31465T1465IaCtaTt11AY.120.000316
ORF1ab/nsp31465T1465IaCtaTt11AY.120.20.001285
ORF1ab/nsp31465T1465IaCtaTt11AY.130.000161
ORF1ab/nsp31465T1465IaCtaTt11AY.16.10.00047
ORF1ab/nsp31465T1465IaCtaTt11AY.240.000431
ORF1ab/nsp31465T1465IaCtaTt11AY.270.000065
ORF1ab/nsp31465T1465IaCtaTt11AY.34.10.00051
ORF1ab/nsp31465T1465IaCtaTt11AY.360.000148
ORF1ab/nsp31465T1465IaCtaTt11AY.380.000499
ORF1ab/nsp31465T1465IaCtaTt11AY.4.10.000737
ORF1ab/nsp31465T1465IaCtaTt11AY.410.000294
ORF1ab/nsp31465T1465IaCtaTt11AY.46.60.000072
ORF1ab/nsp31465T1465IaCtaTt11AY.5.40.000277
ORF1ab/nsp31465T1465IaCtaTt11AY.620.000436
ORF1ab/nsp31465T1465IaCtaTt11AY.650.000533
ORF1ab/nsp31465T1465IaCtaTt11AY.690.000187
ORF1ab/nsp31465T1465IaCtaTt11AY.7.10.000113
ORF1ab/nsp31465T1465IaCtaTt11AY.710.000475
ORF1ab/nsp31465T1465IaCtaTt11AY.850.000427
ORF1ab/nsp31465T1465IaCtaTt11AY.910.00073
ORF1ab/nsp31465T1465IaCtaTt11AY.930.000273
ORF1ab/nsp31465T1465IaCtaTt11AZ.20.000821
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.1640.005155
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.1920.002309
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.2190.005
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.2250.007194
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.2420.043478
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.2530.002506
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.2610.008621
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.2840.000107
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.3090.005848
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.330.000421
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.3350.012987
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.3690.000446
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.4040.015873
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.4090.002833
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.4320.001266
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.490.017544
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.5230.001563
ORF1ab/nsp31465T1465IaCtaTt11B.1.1.550.012987
ORF1ab/nsp31465T1465IaCtaTt11B.1.1120.005181
ORF1ab/nsp31465T1465IaCtaTt11B.1.1270.002198
ORF1ab/nsp31465T1465IaCtaTt11B.1.130.002375
ORF1ab/nsp31465T1465IaCtaTt11B.1.160.160.000929
ORF1ab/nsp31465T1465IaCtaTt11B.1.177.160.000664
ORF1ab/nsp31465T1465IaCtaTt11B.1.177.40.000211
ORF1ab/nsp31465T1465IaCtaTt11B.1.177.500.004695
ORF1ab/nsp31465T1465IaCtaTt11B.1.177.520.001757
ORF1ab/nsp31465T1465IaCtaTt11B.1.177.570.000281
ORF1ab/nsp31465T1465IaCtaTt11B.1.177.70.000165
ORF1ab/nsp31465T1465IaCtaTt11B.1.177.720.00339
ORF1ab/nsp31465T1465IaCtaTt11B.1.177.730.000566
ORF1ab/nsp31465T1465IaCtaTt11B.1.177.750.001041
ORF1ab/nsp31465T1465IaCtaTt11B.1.177.80.000752
ORF1ab/nsp31465T1465IaCtaTt11B.1.177.830.001481
ORF1ab/nsp31465T1465IaCtaTt11B.1.2060.000816
ORF1ab/nsp31465T1465IaCtaTt11B.1.214.20.0006
ORF1ab/nsp31465T1465IaCtaTt11B.1.220.001318
ORF1ab/nsp31465T1465IaCtaTt11B.1.230.006061
ORF1ab/nsp31465T1465IaCtaTt11B.1.258.40.003448
ORF1ab/nsp31465T1465IaCtaTt11B.1.258.50.008772
ORF1ab/nsp31465T1465IaCtaTt11B.1.2650.001271
ORF1ab/nsp31465T1465IaCtaTt11B.1.2810.021739
ORF1ab/nsp31465T1465IaCtaTt11B.1.2930.0125
ORF1ab/nsp31465T1465IaCtaTt11B.1.3240.001605
ORF1ab/nsp31465T1465IaCtaTt11B.1.3360.002439
ORF1ab/nsp31465T1465IaCtaTt11B.1.36.170.000494
ORF1ab/nsp31465T1465IaCtaTt11B.1.36.180.00042
ORF1ab/nsp31465T1465IaCtaTt11B.1.36.310.001751
ORF1ab/nsp31465T1465IaCtaTt11B.1.36.360.000602
ORF1ab/nsp31465T1465IaCtaTt11B.1.36.70.004
ORF1ab/nsp31465T1465IaCtaTt11B.1.3670.000792
ORF1ab/nsp31465T1465IaCtaTt11B.1.3690.000285
ORF1ab/nsp31465T1465IaCtaTt11B.1.3890.001002
ORF1ab/nsp31465T1465IaCtaTt11B.1.3960.000706
ORF1ab/nsp31465T1465IaCtaTt11B.1.438.10.000107
ORF1ab/nsp31465T1465IaCtaTt11B.1.4650.003802
ORF1ab/nsp31465T1465IaCtaTt11B.1.466.10.007194
ORF1ab/nsp31465T1465IaCtaTt11B.1.4670.04
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