CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T133T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3133T133TT951TsynacTacC5334610.8649163116-3118
ORF1ab/nsp3133T133TT951TsynacTacA533380.07129463116-3118
ORF1ab/nsp3133T133TT951TsynacTacG533340.06378993116-3118

Details of the mutation T133T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3133T133TacTacC461533All0.000088
ORF1ab/nsp3133T133TacTacA38533All0.000007
ORF1ab/nsp3133T133TacTacG34533All0.000007
ORF1ab/nsp3133T133TacTacC238242B.1.1.70.000213
ORF1ab/nsp3133T133TacTacG2242B.1.1.70.000002
ORF1ab/nsp3133T133TacTacA2242B.1.1.70.000002
ORF1ab/nsp3133T133TacTacC5858B.1.36.200.983051
ORF1ab/nsp3133T133TacTacC2529AY.40.000039
ORF1ab/nsp3133T133TacTacG229AY.40.000003
ORF1ab/nsp3133T133TacTacA229AY.40.000003
ORF1ab/nsp3133T133TacTacA2828S.10.138614
ORF1ab/nsp3133T133TacTacG1823B.1.20.000158
ORF1ab/nsp3133T133TacTacC323B.1.20.000026
ORF1ab/nsp3133T133TacTacA223B.1.20.000018
ORF1ab/nsp3133T133TacTacC2121AY.30.000209
ORF1ab/nsp3133T133TacTacC2121B.1.177.810.003976
ORF1ab/nsp3133T133TacTacC1515AY.1030.000093
ORF1ab/nsp3133T133TacTacC99AY.250.000054
ORF1ab/nsp3133T133TacTacC59AY.430.000022
ORF1ab/nsp3133T133TacTacG39AY.430.000013
ORF1ab/nsp3133T133TacTacA19AY.430.000004
ORF1ab/nsp3133T133TacTacC89B.1.617.20.00003
ORF1ab/nsp3133T133TacTacG19B.1.617.20.000004
ORF1ab/nsp3133T133TacTacC66B.1.2980.012685
ORF1ab/nsp3133T133TacTacC55B.1.2210.000355
ORF1ab/nsp3133T133TacTacC44AY.270.000259
ORF1ab/nsp3133T133TacTacC44AY.50.000083
ORF1ab/nsp3133T133TacTacG44P.1.150.000929
ORF1ab/nsp3133T133TacTacC33AY.590.001589
ORF1ab/nsp3133T133TacTacC23B.10.000018
ORF1ab/nsp3133T133TacTacG13B.10.000009
ORF1ab/nsp3133T133TacTacC33B.1.1.280.000934
ORF1ab/nsp3133T133TacTacC33B.1.258.30.005025
ORF1ab/nsp3133T133TacTacC22AY.1020.000053
ORF1ab/nsp3133T133TacTacC22AY.230.000139
ORF1ab/nsp3133T133TacTacC12B.1.10.000018
ORF1ab/nsp3133T133TacTacA12B.1.10.000018
ORF1ab/nsp3133T133TacTacC22B.1.1770.000026
ORF1ab/nsp3133T133TacTacC22B.1.3510.000059
ORF1ab/nsp3133T133TacTacC22B.1.3910.002255
ORF1ab/nsp3133T133TacTacC22P.1.140.000096
ORF1ab/nsp3133T133TacTacC11AY.120.000316
ORF1ab/nsp3133T133TacTacC11AY.1210.000135
ORF1ab/nsp3133T133TacTacG11AY.200.000039
ORF1ab/nsp3133T133TacTacC11AY.260.000028
ORF1ab/nsp3133T133TacTacC11AY.390.000025
ORF1ab/nsp3133T133TacTacC11AY.4.20.000022
ORF1ab/nsp3133T133TacTacC11AY.440.000006
ORF1ab/nsp3133T133TacTacC11AY.5.30.000337
ORF1ab/nsp3133T133TacTacC11AY.60.000041
ORF1ab/nsp3133T133TacTacA11AY.930.000273
ORF1ab/nsp3133T133TacTacA11B.1.1.2170.003636
ORF1ab/nsp3133T133TacTacC11B.1.1.2540.011236
ORF1ab/nsp3133T133TacTacC11B.1.1570.002985
ORF1ab/nsp3133T133TacTacG11B.1.177.40.000211
ORF1ab/nsp3133T133TacTacC11B.1.2580.000067
ORF1ab/nsp3133T133TacTacC11B.1.36.380.001642
ORF1ab/nsp3133T133TacTacG11B.1.4290.000024
ORF1ab/nsp3133T133TacTacC11B.1.5820.000491
ORF1ab/nsp3133T133TacTacC11C.36.30.000567
ORF1ab/nsp3133T133TacTacC11Q.10.000126