CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1334I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31334T1334IT2152InonsynaCaaTa296629640.9993266719-6721
ORF1ab/nsp31334T1334IT2152InonsynaCAaTT296620.0006743096719-6721

Details of the mutation T1334I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31334T1334IaCaaTa29642966All0.000567
ORF1ab/nsp31334T1334IaCAaTT22966All0
ORF1ab/nsp31334T1334IaCaaTa590590B.1.1.70.000528
ORF1ab/nsp31334T1334IaCaaTa291291AY.470.009052
ORF1ab/nsp31334T1334IaCaaTa267267AY.40.000416
ORF1ab/nsp31334T1334IaCaaTa139139AY.230.009695
ORF1ab/nsp31334T1334IaCaaTa9696B.1.5260.002256
ORF1ab/nsp31334T1334IaCaaTa8485B.1.617.20.000316
ORF1ab/nsp31334T1334IaCAaTT185B.1.617.20.000004
ORF1ab/nsp31334T1334IaCaaTa8080B.1.20.000704
ORF1ab/nsp31334T1334IaCaaTa7575AY.250.000451
ORF1ab/nsp31334T1334IaCaaTa7575AY.430.000332
ORF1ab/nsp31334T1334IaCaaTa6464AY.440.00039
ORF1ab/nsp31334T1334IaCaaTa6363B.6.80.520661
ORF1ab/nsp31334T1334IaCaaTa5656B.1.1.5190.002224
ORF1ab/nsp31334T1334IaCaaTa5656P.10.000882
ORF1ab/nsp31334T1334IaCaaTa4949AY.4.20.001063
ORF1ab/nsp31334T1334IaCaaTa4444B.1.1770.000579
ORF1ab/nsp31334T1334IaCaaTa4141B.10.000376
ORF1ab/nsp31334T1334IaCaaTa3939B.1.258.90.195
ORF1ab/nsp31334T1334IaCaaTa3838AY.260.001076
ORF1ab/nsp31334T1334IaCaaTa2929AY.30.000288
ORF1ab/nsp31334T1334IaCaaTa2929B.1.10.000526
ORF1ab/nsp31334T1334IaCaaTa2828AY.1030.000174
ORF1ab/nsp31334T1334IaCaaTa2828B.1.351.30.02454
ORF1ab/nsp31334T1334IaCaaTa2727B.1.5650.02188
ORF1ab/nsp31334T1334IaCaaTa2323AY.98.10.001114
ORF1ab/nsp31334T1334IaCaaTa2121B.1.4290.000494
ORF1ab/nsp31334T1334IaCaaTa2020AY.1200.000744
ORF1ab/nsp31334T1334IaCaaTa2020AY.4.2.10.00298
ORF1ab/nsp31334T1334IaCaaTa1818B.1.1.3170.00741
ORF1ab/nsp31334T1334IaCaaTa1818B.1.360.002626
ORF1ab/nsp31334T1334IaCaaTa1717B.1.1.3060.007453
ORF1ab/nsp31334T1334IaCaaTa1515AY.1020.000398
ORF1ab/nsp31334T1334IaCaaTa1515B.1.5960.001307
ORF1ab/nsp31334T1334IaCaaTa1414AY.1180.000877
ORF1ab/nsp31334T1334IaCaaTa1414B.1.6370.001023
ORF1ab/nsp31334T1334IaCaaTa1212AY.290.000189
ORF1ab/nsp31334T1334IaCaaTa1212B.1.2430.000835
ORF1ab/nsp31334T1334IaCaaTa1111AY.880.009726
ORF1ab/nsp31334T1334IaCaaTa1111B.1.438.10.00118
ORF1ab/nsp31334T1334IaCaaTa1111P.1.140.000526
ORF1ab/nsp31334T1334IaCaaTa1010AY.390.000247
ORF1ab/nsp31334T1334IaCaaTa1010B.1.1.2980.008621
ORF1ab/nsp31334T1334IaCaaTa1010B.1.3510.000297
ORF1ab/nsp31334T1334IaCaaTa1010P.30.015949
ORF1ab/nsp31334T1334IaCaaTa99AY.4.50.000967
ORF1ab/nsp31334T1334IaCaaTa99B.1.1600.000281
ORF1ab/nsp31334T1334IaCaaTa99B.1.177.860.001651
ORF1ab/nsp31334T1334IaCaaTa99B.1.2580.000599
ORF1ab/nsp31334T1334IaCaaTa99C.370.001045
ORF1ab/nsp31334T1334IaCaaTa88A0.003096
ORF1ab/nsp31334T1334IaCaaTa88AY.1000.000368
ORF1ab/nsp31334T1334IaCaaTa88AY.420.000322
ORF1ab/nsp31334T1334IaCaaTa88AY.790.009685
ORF1ab/nsp31334T1334IaCaaTa88B.1.6320.053691
ORF1ab/nsp31334T1334IaCaaTa88C.310.142857
ORF1ab/nsp31334T1334IaCaaTa77AY.1190.000247
ORF1ab/nsp31334T1334IaCaaTa77B.1.1.3220.061404
ORF1ab/nsp31334T1334IaCaaTa77B.60.006369
ORF1ab/nsp31334T1334IaCaaTa77P.1.150.001626
ORF1ab/nsp31334T1334IaCaaTa66AY.50.000124
ORF1ab/nsp31334T1334IaCaaTa66AY.60.000247
ORF1ab/nsp31334T1334IaCaaTa66B.1.1.2220.001224
ORF1ab/nsp31334T1334IaCaaTa66B.1.621.10.003035
ORF1ab/nsp31334T1334IaCaaTa66B.1.6250.014118
ORF1ab/nsp31334T1334IaCaaTa55AY.1130.000712
ORF1ab/nsp31334T1334IaCaaTa55AY.200.000194
ORF1ab/nsp31334T1334IaCaaTa55AY.330.000334
ORF1ab/nsp31334T1334IaCaaTa55AY.460.00052
ORF1ab/nsp31334T1334IaCaaTa44A.10.001127
ORF1ab/nsp31334T1334IaCaaTa44AY.450.000487
ORF1ab/nsp31334T1334IaCaaTa44AY.530.00115
ORF1ab/nsp31334T1334IaCaaTa44B.1.177.570.001124
ORF1ab/nsp31334T1334IaCaaTa44B.1.4270.000202
ORF1ab/nsp31334T1334IaCaaTa44B.1.466.20.001565
ORF1ab/nsp31334T1334IaCaaTa33AY.1160.00086
ORF1ab/nsp31334T1334IaCaaTa33AY.360.000445
ORF1ab/nsp31334T1334IaCaaTa23AY.46.60.000144
ORF1ab/nsp31334T1334IaCAaTT13AY.46.60.000072
ORF1ab/nsp31334T1334IaCaaTa33AY.540.000286
ORF1ab/nsp31334T1334IaCaaTa33AY.550.002752
ORF1ab/nsp31334T1334IaCaaTa33AY.610.000314
ORF1ab/nsp31334T1334IaCaaTa33AY.730.001996
ORF1ab/nsp31334T1334IaCaaTa33AY.9.20.00011
ORF1ab/nsp31334T1334IaCaaTa33AY.99.20.000276
ORF1ab/nsp31334T1334IaCaaTa33B.1.1.2690.00406
ORF1ab/nsp31334T1334IaCaaTa33B.1.1.280.000934
ORF1ab/nsp31334T1334IaCaaTa33B.1.1.4340.001046
ORF1ab/nsp31334T1334IaCaaTa33B.1.1.4520.333333
ORF1ab/nsp31334T1334IaCaaTa33B.1.160.170.005102
ORF1ab/nsp31334T1334IaCaaTa33B.1.351.20.000908
ORF1ab/nsp31334T1334IaCaaTa33B.1.36.80.003
ORF1ab/nsp31334T1334IaCaaTa33B.1.5250.000339
ORF1ab/nsp31334T1334IaCaaTa33P.1.170.000485
ORF1ab/nsp31334T1334IaCaaTa220.111111
ORF1ab/nsp31334T1334IaCaaTa22A.270.003311
ORF1ab/nsp31334T1334IaCaaTa22AY.1170.000169
ORF1ab/nsp31334T1334IaCaaTa22AY.1210.000271
ORF1ab/nsp31334T1334IaCaaTa22AY.140.000176
ORF1ab/nsp31334T1334IaCaaTa22AY.20.000712
ORF1ab/nsp31334T1334IaCaaTa22AY.39.10.000079
ORF1ab/nsp31334T1334IaCaaTa22AY.46.50.000397
ORF1ab/nsp31334T1334IaCaaTa22AY.5.20.004926
ORF1ab/nsp31334T1334IaCaaTa22AY.690.000373
ORF1ab/nsp31334T1334IaCaaTa22AY.750.000112
ORF1ab/nsp31334T1334IaCaaTa22AY.840.000875
ORF1ab/nsp31334T1334IaCaaTa22AY.980.000158
ORF1ab/nsp31334T1334IaCaaTa22B.1.1.2650.006309
ORF1ab/nsp31334T1334IaCaaTa22B.1.1.50.016667
ORF1ab/nsp31334T1334IaCaaTa22B.1.160.80.002577
ORF1ab/nsp31334T1334IaCaaTa22B.1.177.120.000303
ORF1ab/nsp31334T1334IaCaaTa22B.1.177.810.000379
ORF1ab/nsp31334T1334IaCaaTa22B.1.36.180.00084
ORF1ab/nsp31334T1334IaCaaTa22B.1.36.340.042553
ORF1ab/nsp31334T1334IaCaaTa22B.1.4280.002041
ORF1ab/nsp31334T1334IaCaaTa22B.1.4360.002058
ORF1ab/nsp31334T1334IaCaaTa22B.1.4690.00722
ORF1ab/nsp31334T1334IaCaaTa22B.1.617.10.000258
ORF1ab/nsp31334T1334IaCaaTa22B.1.6210.000177
ORF1ab/nsp31334T1334IaCaaTa22C.36.30.001134
ORF1ab/nsp31334T1334IaCaaTa22P.1.70.000639
ORF1ab/nsp31334T1334IaCaaTa11A.2.50.000499
ORF1ab/nsp31334T1334IaCaaTa11A.2.5.20.001572
ORF1ab/nsp31334T1334IaCaaTa11A.280.002646
ORF1ab/nsp31334T1334IaCaaTa11AE.10.011364
ORF1ab/nsp31334T1334IaCaaTa11AU.10.001266
ORF1ab/nsp31334T1334IaCaaTa11AY.10.000396
ORF1ab/nsp31334T1334IaCaaTa11AY.1060.000335
ORF1ab/nsp31334T1334IaCaaTa11AY.1100.000113
ORF1ab/nsp31334T1334IaCaaTa11AY.1110.000183
ORF1ab/nsp31334T1334IaCaaTa11AY.1140.000231
ORF1ab/nsp31334T1334IaCaaTa11AY.120.000316
ORF1ab/nsp31334T1334IaCaaTa11AY.150.002222
ORF1ab/nsp31334T1334IaCaaTa11AY.270.000065
ORF1ab/nsp31334T1334IaCaaTa11AY.34.10.00051
ORF1ab/nsp31334T1334IaCaaTa11AY.46.20.000635
ORF1ab/nsp31334T1334IaCaaTa11AY.590.00053
ORF1ab/nsp31334T1334IaCaaTa11AY.620.000436
ORF1ab/nsp31334T1334IaCaaTa11AY.630.000387
ORF1ab/nsp31334T1334IaCaaTa11AY.670.000464
ORF1ab/nsp31334T1334IaCaaTa11AY.7.20.000559
ORF1ab/nsp31334T1334IaCaaTa11AY.700.000209
ORF1ab/nsp31334T1334IaCaaTa11AY.740.000116
ORF1ab/nsp31334T1334IaCaaTa11AY.870.000833
ORF1ab/nsp31334T1334IaCaaTa11AY.90.000068
ORF1ab/nsp31334T1334IaCaaTa11AY.9.10.000084
ORF1ab/nsp31334T1334IaCaaTa11AY.930.000273
ORF1ab/nsp31334T1334IaCaaTa11AY.940.000443
ORF1ab/nsp31334T1334IaCaaTa11AZ.10.000867
ORF1ab/nsp31334T1334IaCaaTa11B0.000128
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.10.000327
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.1980.001468
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.250.000569
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.2530.002506
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.2730.006757
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.2940.001266
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.3040.002809
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.3180.000302
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.3650.005587
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.3720.000689
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.3740.002375
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.3750.011905
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.4130.006897
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.4320.001266
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.460.004367
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.5230.001563
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.700.000341
ORF1ab/nsp31334T1334IaCaaTa11B.1.1.830.00271
ORF1ab/nsp31334T1334IaCaaTa11B.1.1040.00369
ORF1ab/nsp31334T1334IaCaaTa11B.1.1390.000733
ORF1ab/nsp31334T1334IaCaaTa11B.1.177.300.002513
ORF1ab/nsp31334T1334IaCaaTa11B.1.177.40.000211
ORF1ab/nsp31334T1334IaCaaTa11B.1.177.530.002392
ORF1ab/nsp31334T1334IaCaaTa11B.1.177.870.000728
ORF1ab/nsp31334T1334IaCaaTa11B.1.2100.002132
ORF1ab/nsp31334T1334IaCaaTa11B.1.2210.000071
ORF1ab/nsp31334T1334IaCaaTa11B.1.2230.002778
ORF1ab/nsp31334T1334IaCaaTa11B.1.2340.000132
ORF1ab/nsp31334T1334IaCaaTa11B.1.3280.03125
ORF1ab/nsp31334T1334IaCaaTa11B.1.3290.000608
ORF1ab/nsp31334T1334IaCaaTa11B.1.3670.000792
ORF1ab/nsp31334T1334IaCaaTa11B.1.3780.006849
ORF1ab/nsp31334T1334IaCaaTa11B.1.4020.009804
ORF1ab/nsp31334T1334IaCaaTa11B.1.4160.001269
ORF1ab/nsp31334T1334IaCaaTa11B.1.416.10.001563
ORF1ab/nsp31334T1334IaCaaTa11B.1.4220.000812
ORF1ab/nsp31334T1334IaCaaTa11B.1.4480.002625
ORF1ab/nsp31334T1334IaCaaTa11B.1.4560.003268
ORF1ab/nsp31334T1334IaCaaTa11B.1.5090.000866
ORF1ab/nsp31334T1334IaCaaTa11B.1.5610.000397
ORF1ab/nsp31334T1334IaCaaTa11B.1.6000.005848
ORF1ab/nsp31334T1334IaCaaTa11B.1.6090.000479
ORF1ab/nsp31334T1334IaCaaTa11B.1.6190.000871
ORF1ab/nsp31334T1334IaCaaTa11B.1.6280.000352
ORF1ab/nsp31334T1334IaCaaTa11C.340.037037
ORF1ab/nsp31334T1334IaCaaTa11C.350.000774
ORF1ab/nsp31334T1334IaCaaTa11N.50.001767
ORF1ab/nsp31334T1334IaCaaTa11P.1.120.000484
ORF1ab/nsp31334T1334IaCaaTa11P.1.130.000898
ORF1ab/nsp31334T1334IaCaaTa11P.20.000187
ORF1ab/nsp31334T1334IaCaaTa11Q.10.000126
ORF1ab/nsp31334T1334IaCaaTa11Q.80.000165
ORF1ab/nsp31334T1334IaCaaTa11W.40.001351