CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1334A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31334T1334AT2152AnonsynAcaGca25025016719-6721

Details of the mutation T1334A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31334T1334AAcaGca250250All0.000048
ORF1ab/nsp31334T1334AAcaGca7878B.1.1.70.00007
ORF1ab/nsp31334T1334AAcaGca3131AY.250.000186
ORF1ab/nsp31334T1334AAcaGca1919AY.40.00003
ORF1ab/nsp31334T1334AAcaGca1818B.1.20.000158
ORF1ab/nsp31334T1334AAcaGca1111B.10.000101
ORF1ab/nsp31334T1334AAcaGca1010B.1.617.20.000038
ORF1ab/nsp31334T1334AAcaGca88AY.1000.000368
ORF1ab/nsp31334T1334AAcaGca66AY.1030.000037
ORF1ab/nsp31334T1334AAcaGca66AY.30.00006
ORF1ab/nsp31334T1334AAcaGca66AY.440.000037
ORF1ab/nsp31334T1334AAcaGca66B.1.10.000109
ORF1ab/nsp31334T1334AAcaGca55P.1.140.000239
ORF1ab/nsp31334T1334AAcaGca44AY.39.10.000158
ORF1ab/nsp31334T1334AAcaGca44AY.430.000018
ORF1ab/nsp31334T1334AAcaGca33AY.330.0002
ORF1ab/nsp31334T1334AAcaGca33AY.470.000093
ORF1ab/nsp31334T1334AAcaGca33B.1.1600.000094
ORF1ab/nsp31334T1334AAcaGca33B.1.360.000438
ORF1ab/nsp31334T1334AAcaGca33P.10.000047
ORF1ab/nsp31334T1334AAcaGca22AY.1180.000125
ORF1ab/nsp31334T1334AAcaGca22B.1.1770.000026
ORF1ab/nsp31334T1334AAcaGca22B.1.5650.001621
ORF1ab/nsp31334T1334AAcaGca11AE.80.000489
ORF1ab/nsp31334T1334AAcaGca11AY.116.10.000311
ORF1ab/nsp31334T1334AAcaGca11AY.120.000316
ORF1ab/nsp31334T1334AAcaGca11AY.290.000016
ORF1ab/nsp31334T1334AAcaGca11AY.4.20.000022
ORF1ab/nsp31334T1334AAcaGca11AY.610.000105
ORF1ab/nsp31334T1334AAcaGca11AY.75.10.00018
ORF1ab/nsp31334T1334AAcaGca11AY.9.20.000037
ORF1ab/nsp31334T1334AAcaGca11B.1.1.280.000311
ORF1ab/nsp31334T1334AAcaGca11B.1.1.330.000421
ORF1ab/nsp31334T1334AAcaGca11B.1.1.3760.005952
ORF1ab/nsp31334T1334AAcaGca11B.1.177.200.001517
ORF1ab/nsp31334T1334AAcaGca11B.1.177.570.000281
ORF1ab/nsp31334T1334AAcaGca11B.1.258.30.001675
ORF1ab/nsp31334T1334AAcaGca11B.1.3510.00003
ORF1ab/nsp31334T1334AAcaGca11B.1.4270.00005
ORF1ab/nsp31334T1334AAcaGca11C.370.000116