CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1303N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31303T1303NT2121NnonsynaCcaAc99980.9898996626-6628
ORF1ab/nsp31303T1303NT2121NnonsynaCCaAT9910.0101016626-6628

Details of the mutation T1303N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31303T1303NaCcaAc9899All0.000019
ORF1ab/nsp31303T1303NaCCaAT199All0
ORF1ab/nsp31303T1303NaCcaAc1414B.1.4780.164706
ORF1ab/nsp31303T1303NaCcaAc99AY.40.000014
ORF1ab/nsp31303T1303NaCcaAc99B.10.000082
ORF1ab/nsp31303T1303NaCcaAc88B.1.4270.000404
ORF1ab/nsp31303T1303NaCcaAc77AY.4.50.000752
ORF1ab/nsp31303T1303NaCcaAc77AY.430.000031
ORF1ab/nsp31303T1303NaCcaAc66B.1.4290.000141
ORF1ab/nsp31303T1303NaCcaAc44B.1.20.000035
ORF1ab/nsp31303T1303NaCcaAc33B.1.1.70.000003
ORF1ab/nsp31303T1303NaCcaAc33B.1.9.40.018405
ORF1ab/nsp31303T1303NaCCaAT120.055556
ORF1ab/nsp31303T1303NaCcaAc120.055556
ORF1ab/nsp31303T1303NaCcaAc22AY.440.000012
ORF1ab/nsp31303T1303NaCcaAc22B.1.1600.000062
ORF1ab/nsp31303T1303NaCcaAc22B.1.177.440.001038
ORF1ab/nsp31303T1303NaCcaAc22B.1.2580.000133
ORF1ab/nsp31303T1303NaCcaAc22B.1.3110.000549
ORF1ab/nsp31303T1303NaCcaAc22B.1.617.20.000008
ORF1ab/nsp31303T1303NaCcaAc11AY.1200.000037
ORF1ab/nsp31303T1303NaCcaAc11AY.580.000907
ORF1ab/nsp31303T1303NaCcaAc11AY.790.001211
ORF1ab/nsp31303T1303NaCcaAc11AY.870.000833
ORF1ab/nsp31303T1303NaCcaAc11AY.90.000068
ORF1ab/nsp31303T1303NaCcaAc11B.1.1.1740.003378
ORF1ab/nsp31303T1303NaCcaAc11B.1.1.370.000193
ORF1ab/nsp31303T1303NaCcaAc11B.1.1.5190.00004
ORF1ab/nsp31303T1303NaCcaAc11B.1.1.630.000386
ORF1ab/nsp31303T1303NaCcaAc11B.1.177.430.001477
ORF1ab/nsp31303T1303NaCcaAc11B.1.177.710.010101
ORF1ab/nsp31303T1303NaCcaAc11B.1.177.810.000189
ORF1ab/nsp31303T1303NaCcaAc11B.1.2210.000071
ORF1ab/nsp31303T1303NaCcaAc11B.1.36.350.002604
ORF1ab/nsp31303T1303NaCcaAc11B.1.5260.000024