CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T127N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3127T127NT945NnonsynaCtaAt106410630.999063098-3100
ORF1ab/nsp3127T127NT945NnonsynaCTaAC106410.000939853098-3100

Details of the mutation T127N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3127T127NaCtaAt10631064All0.000203
ORF1ab/nsp3127T127NaCTaAC11064All0
ORF1ab/nsp3127T127NaCtaAt549549B.1.1.70.000491
ORF1ab/nsp3127T127NaCtaAt344344AY.330.022972
ORF1ab/nsp3127T127NaCtaAt2525AY.40.000039
ORF1ab/nsp3127T127NaCtaAt1717AY.610.001781
ORF1ab/nsp3127T127NaCtaAt1515A.221
ORF1ab/nsp3127T127NaCtaAt1010AY.340.00097
ORF1ab/nsp3127T127NaCtaAt1010B.1.617.20.000038
ORF1ab/nsp3127T127NaCtaAt77AY.20.002493
ORF1ab/nsp3127T127NaCtaAt66AY.200.000233
ORF1ab/nsp3127T127NaCtaAt56B.10.000046
ORF1ab/nsp3127T127NaCTaAC16B.10.000009
ORF1ab/nsp3127T127NaCtaAt55AY.1030.000031
ORF1ab/nsp3127T127NaCtaAt55B.1.10.000091
ORF1ab/nsp3127T127NaCtaAt44B.1.2210.000284
ORF1ab/nsp3127T127NaCtaAt44B.1.621.10.002023
ORF1ab/nsp3127T127NaCtaAt330.166667
ORF1ab/nsp3127T127NaCtaAt33AY.350.000699
ORF1ab/nsp3127T127NaCtaAt33AY.440.000018
ORF1ab/nsp3127T127NaCtaAt33AY.450.000365
ORF1ab/nsp3127T127NaCtaAt33B.1.1.2940.003797
ORF1ab/nsp3127T127NaCtaAt22AY.430.000009
ORF1ab/nsp3127T127NaCtaAt22AY.550.001835
ORF1ab/nsp3127T127NaCtaAt22AY.75.10.000361
ORF1ab/nsp3127T127NaCtaAt22AY.98.10.000097
ORF1ab/nsp3127T127NaCtaAt22B.1.1600.000062
ORF1ab/nsp3127T127NaCtaAt22B.1.1770.000026
ORF1ab/nsp3127T127NaCtaAt22B.1.20.000018
ORF1ab/nsp3127T127NaCtaAt22B.1.3510.000059
ORF1ab/nsp3127T127NaCtaAt22B.1.617.10.000258
ORF1ab/nsp3127T127NaCtaAt22B.1.6210.000177
ORF1ab/nsp3127T127NaCtaAt11A0.000387
ORF1ab/nsp3127T127NaCtaAt11AY.290.000016
ORF1ab/nsp3127T127NaCtaAt11AY.4.20.000022
ORF1ab/nsp3127T127NaCtaAt11AY.500.000799
ORF1ab/nsp3127T127NaCtaAt11AY.60.000041
ORF1ab/nsp3127T127NaCtaAt11AY.690.000187
ORF1ab/nsp3127T127NaCtaAt11AY.730.000665
ORF1ab/nsp3127T127NaCtaAt11AY.9.20.000037
ORF1ab/nsp3127T127NaCtaAt11AY.900.000684
ORF1ab/nsp3127T127NaCtaAt11AY.980.000079
ORF1ab/nsp3127T127NaCtaAt11B0.000128
ORF1ab/nsp3127T127NaCtaAt11B.1.1.1610.003534
ORF1ab/nsp3127T127NaCtaAt11B.1.1390.000733
ORF1ab/nsp3127T127NaCtaAt11B.1.177.100.000878
ORF1ab/nsp3127T127NaCtaAt11B.1.177.150.000631
ORF1ab/nsp3127T127NaCtaAt11B.1.3360.002439
ORF1ab/nsp3127T127NaCtaAt11B.1.36.290.000517
ORF1ab/nsp3127T127NaCtaAt11B.1.3690.000285
ORF1ab/nsp3127T127NaCtaAt11B.1.4040.001302
ORF1ab/nsp3127T127NaCtaAt11B.1.5260.000024
ORF1ab/nsp3127T127NaCtaAt11B.1.5760.000907
ORF1ab/nsp3127T127NaCtaAt11P.10.000016