CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1269A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31269T1269AT2087AnonsynAcaGca898916524-6526

Details of the mutation T1269A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31269T1269AAcaGca8989All0.000017
ORF1ab/nsp31269T1269AAcaGca4646R.10.00414
ORF1ab/nsp31269T1269AAcaGca77AY.250.000042
ORF1ab/nsp31269T1269AAcaGca55B.1.617.20.000019
ORF1ab/nsp31269T1269AAcaGca44B.1.1.70.000004
ORF1ab/nsp31269T1269AAcaGca22AY.320.001065
ORF1ab/nsp31269T1269AAcaGca22AY.390.000049
ORF1ab/nsp31269T1269AAcaGca22AY.4.20.000043
ORF1ab/nsp31269T1269AAcaGca22AY.440.000012
ORF1ab/nsp31269T1269AAcaGca22B.1.2210.000142
ORF1ab/nsp31269T1269AAcaGca22B.1.6360.013423
ORF1ab/nsp31269T1269AAcaGca11AY.1000.000046
ORF1ab/nsp31269T1269AAcaGca11AY.1090.00074
ORF1ab/nsp31269T1269AAcaGca11AY.1180.000063
ORF1ab/nsp31269T1269AAcaGca11AY.260.000028
ORF1ab/nsp31269T1269AAcaGca11AY.39.10.00004
ORF1ab/nsp31269T1269AAcaGca11AY.40.000002
ORF1ab/nsp31269T1269AAcaGca11AY.430.000004
ORF1ab/nsp31269T1269AAcaGca11AY.980.000079
ORF1ab/nsp31269T1269AAcaGca11B.10.000009
ORF1ab/nsp31269T1269AAcaGca11B.1.1.10.000327
ORF1ab/nsp31269T1269AAcaGca11B.1.1.3680.003086
ORF1ab/nsp31269T1269AAcaGca11B.1.1770.000013
ORF1ab/nsp31269T1269AAcaGca11B.1.4290.000024
ORF1ab/nsp31269T1269AAcaGca11B.1.617.10.000129
ORF1ab/nsp31269T1269AAcaGca11C.350.000774