CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1250del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31250T1250delT2068deldelACT---57357316467-6469

Details of the mutation T1250del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31250T1250delACT---573573All0.00011
ORF1ab/nsp31250T1250delACT---525525L.11
ORF1ab/nsp31250T1250delACT---1313B.10.000119
ORF1ab/nsp31250T1250delACT---77B.1.1.70.000006
ORF1ab/nsp31250T1250delACT---66B.1.1.100.006689
ORF1ab/nsp31250T1250delACT---44B.1.1.5190.000159
ORF1ab/nsp31250T1250delACT---22AY.40.000003
ORF1ab/nsp31250T1250delACT---22AY.470.000062
ORF1ab/nsp31250T1250delACT---22B.1.10.000036
ORF1ab/nsp31250T1250delACT---11AY.250.000006
ORF1ab/nsp31250T1250delACT---11AY.30.00001
ORF1ab/nsp31250T1250delACT---11AY.4.50.000107
ORF1ab/nsp31250T1250delACT---11AY.660.00107
ORF1ab/nsp31250T1250delACT---11B.1.1.1330.008475
ORF1ab/nsp31250T1250delACT---11B.1.1.3480.000796
ORF1ab/nsp31250T1250delACT---11B.1.1770.000013
ORF1ab/nsp31250T1250delACT---11B.1.177.510.004566
ORF1ab/nsp31250T1250delACT---11B.1.177.620.001192
ORF1ab/nsp31250T1250delACT---11B.1.177.70.000165
ORF1ab/nsp31250T1250delACT---11B.1.177.830.001481
ORF1ab/nsp31250T1250delACT---11B.1.617.20.000004