CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1238A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31238T1238AT2056AnonsynAccGcc44430.9772736431-6433
ORF1ab/nsp31238T1238AT2056AnonsynAcCGcA4410.02272736431-6433

Details of the mutation T1238A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31238T1238AAccGcc4344All0.000008
ORF1ab/nsp31238T1238AAcCGcA144All0
ORF1ab/nsp31238T1238AAccGcc1515AY.98.10.000726
ORF1ab/nsp31238T1238AAccGcc66B.1.3200.007472
ORF1ab/nsp31238T1238AAccGcc55AY.740.000578
ORF1ab/nsp31238T1238AAccGcc55B.1.3560.008636
ORF1ab/nsp31238T1238AAccGcc33AY.290.000047
ORF1ab/nsp31238T1238AAccGcc33B.1.3510.000089
ORF1ab/nsp31238T1238AAccGcc12AY.390.000025
ORF1ab/nsp31238T1238AAcCGcA12AY.390.000025
ORF1ab/nsp31238T1238AAccGcc22AY.40.000003
ORF1ab/nsp31238T1238AAccGcc11AY.30.00001
ORF1ab/nsp31238T1238AAccGcc11AY.39.10.00004
ORF1ab/nsp31238T1238AAccGcc11AY.750.000056