CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1198T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31198T1198TT2016TsynacAacG1771320.7457636311-6313
ORF1ab/nsp31198T1198TT2016TsynacAacT177340.192096311-6313
ORF1ab/nsp31198T1198TT2016TsynacAacC177110.06214696311-6313

Details of the mutation T1198T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31198T1198TacAacG132177All0.000025
ORF1ab/nsp31198T1198TacAacT34177All0.000007
ORF1ab/nsp31198T1198TacAacC11177All0.000002
ORF1ab/nsp31198T1198TacAacG7878AY.1030.000484
ORF1ab/nsp31198T1198TacAacG1117B.1.1.70.00001
ORF1ab/nsp31198T1198TacAacT617B.1.1.70.000005
ORF1ab/nsp31198T1198TacAacT1010AY.30.000099
ORF1ab/nsp31198T1198TacAacC810AY.430.000035
ORF1ab/nsp31198T1198TacAacG210AY.430.000009
ORF1ab/nsp31198T1198TacAacG1010B.1.4290.000235
ORF1ab/nsp31198T1198TacAacG69B.10.000055
ORF1ab/nsp31198T1198TacAacT39B.10.000027
ORF1ab/nsp31198T1198TacAacT55AY.290.000079
ORF1ab/nsp31198T1198TacAacG33AY.570.001969
ORF1ab/nsp31198T1198TacAacG33B.1.1.2160.002671
ORF1ab/nsp31198T1198TacAacT23B.1.1770.000026
ORF1ab/nsp31198T1198TacAacG13B.1.1770.000013
ORF1ab/nsp31198T1198TacAacT22AY.1020.000053
ORF1ab/nsp31198T1198TacAacT22AY.330.000134
ORF1ab/nsp31198T1198TacAacC22AY.370.000632
ORF1ab/nsp31198T1198TacAacT22AY.9.10.000167
ORF1ab/nsp31198T1198TacAacG22B.1.1600.000062
ORF1ab/nsp31198T1198TacAacG22B.1.2430.000139
ORF1ab/nsp31198T1198TacAacG22B.1.258.170.000208
ORF1ab/nsp31198T1198TacAacG22B.1.617.20.000008
ORF1ab/nsp31198T1198TacAacG22C.370.000232
ORF1ab/nsp31198T1198TacAacG22P.1.150.000465
ORF1ab/nsp31198T1198TacAacG11AY.1000.000046
ORF1ab/nsp31198T1198TacAacT11AY.250.000006
ORF1ab/nsp31198T1198TacAacT11AY.40.000002
ORF1ab/nsp31198T1198TacAacC11AY.440.000006
ORF1ab/nsp31198T1198TacAacG11B0.000128
ORF1ab/nsp31198T1198TacAacG11B.1.1.5190.00004
ORF1ab/nsp31198T1198TacAacG11B.1.5960.000087
ORF1ab/nsp31198T1198TacAacG11B.190.037037
ORF1ab/nsp31198T1198TacAacG11B.200.023256