CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1189A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31189T1189AT2007AnonsynAccGcc38338316284-6286

Details of the mutation T1189A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31189T1189AAccGcc383383All0.000073
ORF1ab/nsp31189T1189AAccGcc191191AY.4.20.004143
ORF1ab/nsp31189T1189AAccGcc6060AY.40.000093
ORF1ab/nsp31189T1189AAccGcc5050B.1.20.00044
ORF1ab/nsp31189T1189AAccGcc1010B.1.3490.007148
ORF1ab/nsp31189T1189AAccGcc88B.1.617.20.00003
ORF1ab/nsp31189T1189AAccGcc77AY.30.00007
ORF1ab/nsp31189T1189AAccGcc77AY.900.004791
ORF1ab/nsp31189T1189AAccGcc77B.1.1.70.000006
ORF1ab/nsp31189T1189AAccGcc44AY.440.000024
ORF1ab/nsp31189T1189AAccGcc44AY.46.40.000658
ORF1ab/nsp31189T1189AAccGcc44AY.750.000224
ORF1ab/nsp31189T1189AAccGcc33B.1.1.5190.000119
ORF1ab/nsp31189T1189AAccGcc33B.1.3510.000089
ORF1ab/nsp31189T1189AAccGcc22AY.250.000012
ORF1ab/nsp31189T1189AAccGcc22AY.330.000134
ORF1ab/nsp31189T1189AAccGcc22B.1.1.330.000842
ORF1ab/nsp31189T1189AAccGcc11A.2.50.000499
ORF1ab/nsp31189T1189AAccGcc11AY.1020.000027
ORF1ab/nsp31189T1189AAccGcc11AY.1180.000063
ORF1ab/nsp31189T1189AAccGcc11AY.1190.000035
ORF1ab/nsp31189T1189AAccGcc11AY.200.000039
ORF1ab/nsp31189T1189AAccGcc11AY.290.000016
ORF1ab/nsp31189T1189AAccGcc11AY.3.10.000085
ORF1ab/nsp31189T1189AAccGcc11AY.390.000025
ORF1ab/nsp31189T1189AAccGcc11AY.420.00004
ORF1ab/nsp31189T1189AAccGcc11AY.430.000004
ORF1ab/nsp31189T1189AAccGcc11AY.470.000031
ORF1ab/nsp31189T1189AAccGcc11AY.50.000021
ORF1ab/nsp31189T1189AAccGcc11AY.710.000475
ORF1ab/nsp31189T1189AAccGcc11B.10.000009
ORF1ab/nsp31189T1189AAccGcc11B.1.2580.000067
ORF1ab/nsp31189T1189AAccGcc11B.1.3110.000275
ORF1ab/nsp31189T1189AAccGcc11B.1.5640.000426
ORF1ab/nsp31189T1189AAccGcc11P.1.140.000048
ORF1ab/nsp31189T1189AAccGcc11R.10.00009