CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1036T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31036T1036TT1854TsynacAacG117920.7863255825-5827
ORF1ab/nsp31036T1036TT1854TsynacAacT117230.1965815825-5827
ORF1ab/nsp31036T1036TT1854TsynacAacC11720.0170945825-5827

Details of the mutation T1036T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31036T1036TacAacG92117All0.000018
ORF1ab/nsp31036T1036TacAacT23117All0.000004
ORF1ab/nsp31036T1036TacAacC2117All0
ORF1ab/nsp31036T1036TacAacG2828B.10.000256
ORF1ab/nsp31036T1036TacAacG1919AY.270.00123
ORF1ab/nsp31036T1036TacAacT1213AY.40.000019
ORF1ab/nsp31036T1036TacAacG113AY.40.000002
ORF1ab/nsp31036T1036TacAacG1010B.1.1.2220.00204
ORF1ab/nsp31036T1036TacAacG88B.1.20.00007
ORF1ab/nsp31036T1036TacAacT55AY.1030.000031
ORF1ab/nsp31036T1036TacAacG44AY.250.000024
ORF1ab/nsp31036T1036TacAacG44B.1.4620.028986
ORF1ab/nsp31036T1036TacAacT23B.1.1.70.000002
ORF1ab/nsp31036T1036TacAacG13B.1.1.70.000001
ORF1ab/nsp31036T1036TacAacG22AY.120.000632
ORF1ab/nsp31036T1036TacAacT22B.1.617.20.000008
ORF1ab/nsp31036T1036TacAacT12D.20.000075
ORF1ab/nsp31036T1036TacAacG12D.20.000075
ORF1ab/nsp31036T1036TacAacC12P.10.000016
ORF1ab/nsp31036T1036TacAacG12P.10.000016
ORF1ab/nsp31036T1036TacAacG11A.270.001656
ORF1ab/nsp31036T1036TacAacG11AY.1110.000183
ORF1ab/nsp31036T1036TacAacG11AY.120.10.000321
ORF1ab/nsp31036T1036TacAacT11AY.200.000039
ORF1ab/nsp31036T1036TacAacG11AY.30.00001
ORF1ab/nsp31036T1036TacAacG11AY.750.000056
ORF1ab/nsp31036T1036TacAacG11B.1.10.000018
ORF1ab/nsp31036T1036TacAacG11B.1.1.1640.005155
ORF1ab/nsp31036T1036TacAacG11B.1.110.30.000718
ORF1ab/nsp31036T1036TacAacG11B.1.160.90.007194
ORF1ab/nsp31036T1036TacAacG11B.1.177.750.001041
ORF1ab/nsp31036T1036TacAacC11B.1.2320.000537
ORF1ab/nsp31036T1036TacAacG11B.1.9.50.005682
ORF1ab/nsp31036T1036TacAacG11Q.40.000455
ORF1ab/nsp31036T1036TacAacG11Q.80.000165