CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T1022I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31022T1022IT1840InonsynaCtaTt12922129190.9997685783-5785
ORF1ab/nsp31022T1022IT1840InonsynaCTaTC1292220.0001547755783-5785
ORF1ab/nsp31022T1022IT1840InonsynaCTaTA1292210.00007738745783-5785

Details of the mutation T1022I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31022T1022IaCtaTt1291912922All0.002471
ORF1ab/nsp31022T1022IaCTaTC212922All0
ORF1ab/nsp31022T1022IaCTaTA112922All0
ORF1ab/nsp31022T1022IaCtaTt50475047AY.30.050199
ORF1ab/nsp31022T1022IaCtaTt13781378AY.640.820238
ORF1ab/nsp31022T1022IaCtaTt11361136B.1.1.70.001017
ORF1ab/nsp31022T1022IaCtaTt742742AY.40.001155
ORF1ab/nsp31022T1022IaCtaTt600600P.1.140.028681
ORF1ab/nsp31022T1022IaCtaTt414414B.1.5260.009731
ORF1ab/nsp31022T1022IaCtaTt257257AY.1030.001596
ORF1ab/nsp31022T1022IaCtaTt249249B.1.617.20.000938
ORF1ab/nsp31022T1022IaCtaTt195195B.10.001786
ORF1ab/nsp31022T1022IaCtaTt189189B.1.4290.004447
ORF1ab/nsp31022T1022IaCtaTt158159B.1.20.001391
ORF1ab/nsp31022T1022IaCTaTC1159B.1.20.000009
ORF1ab/nsp31022T1022IaCtaTt155155B.1.6000.906433
ORF1ab/nsp31022T1022IaCtaTt140140AY.430.00062
ORF1ab/nsp31022T1022IaCtaTt131131B.1.1770.001725
ORF1ab/nsp31022T1022IaCtaTt112112B.1.1.2840.012029
ORF1ab/nsp31022T1022IaCtaTt100100AY.440.000609
ORF1ab/nsp31022T1022IaCtaTt8989AY.5.30.030027
ORF1ab/nsp31022T1022IaCtaTt7979B.1.3510.002348
ORF1ab/nsp31022T1022IaCtaTt7171AY.250.000427
ORF1ab/nsp31022T1022IaCtaTt6969AY.4.20.001497
ORF1ab/nsp31022T1022IaCtaTt5051B.1.10.000907
ORF1ab/nsp31022T1022IaCTaTA151B.1.10.000018
ORF1ab/nsp31022T1022IaCtaTt5151B.1.1600.001591
ORF1ab/nsp31022T1022IaCtaTt4949P.10.000772
ORF1ab/nsp31022T1022IaCtaTt4747AY.1170.003972
ORF1ab/nsp31022T1022IaCtaTt4141AY.390.001013
ORF1ab/nsp31022T1022IaCtaTt4040AY.1190.001412
ORF1ab/nsp31022T1022IaCtaTt3939A.10.010992
ORF1ab/nsp31022T1022IaCtaTt3939B.1.1.5190.001549
ORF1ab/nsp31022T1022IaCtaTt3939B.1.1700.168103
ORF1ab/nsp31022T1022IaCtaTt3636B.1.2580.002396
ORF1ab/nsp31022T1022IaCtaTt3434B.1.3460.044561
ORF1ab/nsp31022T1022IaCtaTt3232AY.1200.00119
ORF1ab/nsp31022T1022IaCtaTt3232B.1.3930.914286
ORF1ab/nsp31022T1022IaCtaTt3131B.1.177.690.045994
ORF1ab/nsp31022T1022IaCtaTt2929P.1.100.007815
ORF1ab/nsp31022T1022IaCtaTt2626B.1.4530.084142
ORF1ab/nsp31022T1022IaCtaTt2323AY.1020.00061
ORF1ab/nsp31022T1022IaCtaTt2222AY.1180.001378
ORF1ab/nsp31022T1022IaCtaTt2222AY.200.000855
ORF1ab/nsp31022T1022IaCtaTt2222AY.260.000623
ORF1ab/nsp31022T1022IaCtaTt2121AY.610.0022
ORF1ab/nsp31022T1022IaCtaTt2121B.1.177.810.003976
ORF1ab/nsp31022T1022IaCtaTt1818AY.650.009595
ORF1ab/nsp31022T1022IaCtaTt1818B.1.2210.001279
ORF1ab/nsp31022T1022IaCtaTt1818B.1.36.180.007563
ORF1ab/nsp31022T1022IaCtaTt1818B.1.4000.007722
ORF1ab/nsp31022T1022IaCtaTt1818B.1.4270.000909
ORF1ab/nsp31022T1022IaCtaTt1616B.1.177.120.002427
ORF1ab/nsp31022T1022IaCtaTt1616B.1.5250.001811
ORF1ab/nsp31022T1022IaCtaTt1515C.10.035885
ORF1ab/nsp31022T1022IaCtaTt1414AY.300.00554
ORF1ab/nsp31022T1022IaCtaTt1414AY.50.000289
ORF1ab/nsp31022T1022IaCtaTt1414AY.9.10.001172
ORF1ab/nsp31022T1022IaCtaTt1414B.1.1.3180.004225
ORF1ab/nsp31022T1022IaCtaTt1414B.1.177.610.608696
ORF1ab/nsp31022T1022IaCtaTt1414B.1.177.730.007928
ORF1ab/nsp31022T1022IaCtaTt1313AY.140.001144
ORF1ab/nsp31022T1022IaCtaTt1313AY.470.000404
ORF1ab/nsp31022T1022IaCtaTt1112AY.1210.001488
ORF1ab/nsp31022T1022IaCTaTC112AY.1210.000135
ORF1ab/nsp31022T1022IaCtaTt1111B.1.258.140.010784
ORF1ab/nsp31022T1022IaCtaTt1111C.370.001277
ORF1ab/nsp31022T1022IaCtaTt1010AY.1130.001424
ORF1ab/nsp31022T1022IaCtaTt1010AY.330.000668
ORF1ab/nsp31022T1022IaCtaTt1010AY.46.60.000722
ORF1ab/nsp31022T1022IaCtaTt1010B.1.5960.000871
ORF1ab/nsp31022T1022IaCtaTt99AY.130.001449
ORF1ab/nsp31022T1022IaCtaTt99AY.290.000142
ORF1ab/nsp31022T1022IaCtaTt88AY.1160.002294
ORF1ab/nsp31022T1022IaCtaTt88AY.790.009685
ORF1ab/nsp31022T1022IaCtaTt88B0.001022
ORF1ab/nsp31022T1022IaCtaTt88B.1.1.1530.008762
ORF1ab/nsp31022T1022IaCtaTt88B.1.1.500.005431
ORF1ab/nsp31022T1022IaCtaTt88B.1.177.860.001468
ORF1ab/nsp31022T1022IaCtaTt88B.1.617.10.001032
ORF1ab/nsp31022T1022IaCtaTt77AY.1000.000322
ORF1ab/nsp31022T1022IaCtaTt77AY.450.000852
ORF1ab/nsp31022T1022IaCtaTt77AY.550.006422
ORF1ab/nsp31022T1022IaCtaTt77AY.99.20.000645
ORF1ab/nsp31022T1022IaCtaTt77B.1.1.5260.024823
ORF1ab/nsp31022T1022IaCtaTt77B.1.1390.005132
ORF1ab/nsp31022T1022IaCtaTt77B.1.6210.00062
ORF1ab/nsp31022T1022IaCtaTt66AY.1060.002009
ORF1ab/nsp31022T1022IaCtaTt66AY.230.000418
ORF1ab/nsp31022T1022IaCtaTt66AY.240.002586
ORF1ab/nsp31022T1022IaCtaTt66AY.340.000582
ORF1ab/nsp31022T1022IaCtaTt66AY.46.40.000987
ORF1ab/nsp31022T1022IaCtaTt66AY.840.002625
ORF1ab/nsp31022T1022IaCtaTt66AY.98.10.000291
ORF1ab/nsp31022T1022IaCtaTt66B.1.1.2820.069767
ORF1ab/nsp31022T1022IaCtaTt66B.1.1590.073171
ORF1ab/nsp31022T1022IaCtaTt66B.1.5750.00182
ORF1ab/nsp31022T1022IaCtaTt66B.1.6370.000438
ORF1ab/nsp31022T1022IaCtaTt66R.10.00054
ORF1ab/nsp31022T1022IaCtaTt55AP.10.007508
ORF1ab/nsp31022T1022IaCtaTt55AY.920.001436
ORF1ab/nsp31022T1022IaCtaTt55B.1.1.280.001556
ORF1ab/nsp31022T1022IaCtaTt55B.1.160.160.004647
ORF1ab/nsp31022T1022IaCtaTt55B.1.177.330.008224
ORF1ab/nsp31022T1022IaCtaTt55B.1.2430.000348
ORF1ab/nsp31022T1022IaCtaTt55B.1.258.170.00052
ORF1ab/nsp31022T1022IaCtaTt55B.1.360.00073
ORF1ab/nsp31022T1022IaCtaTt55B.1.5240.007032
ORF1ab/nsp31022T1022IaCtaTt55P.1.150.001162
ORF1ab/nsp31022T1022IaCtaTt44A0.001548
ORF1ab/nsp31022T1022IaCtaTt44AY.10.001583
ORF1ab/nsp31022T1022IaCtaTt44AY.1050.002572
ORF1ab/nsp31022T1022IaCtaTt44AY.120.001264
ORF1ab/nsp31022T1022IaCtaTt44AY.16.10.00188
ORF1ab/nsp31022T1022IaCtaTt44AY.370.001264
ORF1ab/nsp31022T1022IaCtaTt44AY.4.50.00043
ORF1ab/nsp31022T1022IaCtaTt44AY.420.000161
ORF1ab/nsp31022T1022IaCtaTt44AY.460.000416
ORF1ab/nsp31022T1022IaCtaTt44AY.620.001743
ORF1ab/nsp31022T1022IaCtaTt44AY.670.001857
ORF1ab/nsp31022T1022IaCtaTt44B.1.1.330.001684
ORF1ab/nsp31022T1022IaCtaTt44B.1.1.3720.002755
ORF1ab/nsp31022T1022IaCtaTt44B.1.1.3890.024242
ORF1ab/nsp31022T1022IaCtaTt44B.1.1.3970.009009
ORF1ab/nsp31022T1022IaCtaTt44B.1.466.20.001565
ORF1ab/nsp31022T1022IaCtaTt44C.380.032258
ORF1ab/nsp31022T1022IaCtaTt33AY.116.10.000934
ORF1ab/nsp31022T1022IaCtaTt33AY.3.10.000256
ORF1ab/nsp31022T1022IaCtaTt33AY.39.10.000119
ORF1ab/nsp31022T1022IaCtaTt33AY.540.000286
ORF1ab/nsp31022T1022IaCtaTt33AY.600.002814
ORF1ab/nsp31022T1022IaCtaTt33AY.750.000168
ORF1ab/nsp31022T1022IaCtaTt33AY.9.20.00011
ORF1ab/nsp31022T1022IaCtaTt33B.1.1.2140.000166
ORF1ab/nsp31022T1022IaCtaTt33B.1.1.2160.002671
ORF1ab/nsp31022T1022IaCtaTt33B.1.1.370.000579
ORF1ab/nsp31022T1022IaCtaTt33B.1.221.20.012048
ORF1ab/nsp31022T1022IaCtaTt33B.1.4160.003807
ORF1ab/nsp31022T1022IaCtaTt33B.1.5090.002597
ORF1ab/nsp31022T1022IaCtaTt33B.1.5510.003871
ORF1ab/nsp31022T1022IaCtaTt33B.1.5560.022556
ORF1ab/nsp31022T1022IaCtaTt33B.1.5610.001191
ORF1ab/nsp31022T1022IaCtaTt33B.1.5880.00273
ORF1ab/nsp31022T1022IaCtaTt33D.20.000225
ORF1ab/nsp31022T1022IaCtaTt33P.30.004785
ORF1ab/nsp31022T1022IaCtaTt33Q.30.000435
ORF1ab/nsp31022T1022IaCtaTt22AH.30.007605
ORF1ab/nsp31022T1022IaCtaTt22AY.1040.003968
ORF1ab/nsp31022T1022IaCtaTt22AY.1100.000225
ORF1ab/nsp31022T1022IaCtaTt22AY.120.10.000642
ORF1ab/nsp31022T1022IaCtaTt22AY.280.003781
ORF1ab/nsp31022T1022IaCtaTt22AY.320.001065
ORF1ab/nsp31022T1022IaCtaTt22AY.350.000466
ORF1ab/nsp31022T1022IaCtaTt22AY.730.001331
ORF1ab/nsp31022T1022IaCtaTt22AY.75.10.000361
ORF1ab/nsp31022T1022IaCtaTt22AY.820.002714
ORF1ab/nsp31022T1022IaCtaTt22AY.910.001461
ORF1ab/nsp31022T1022IaCtaTt22AY.930.000546
ORF1ab/nsp31022T1022IaCtaTt22AY.950.001522
ORF1ab/nsp31022T1022IaCtaTt22AY.960.004149
ORF1ab/nsp31022T1022IaCtaTt22B.1.1.10.000653
ORF1ab/nsp31022T1022IaCtaTt22B.1.1.1720.036364
ORF1ab/nsp31022T1022IaCtaTt22B.1.1.3260.003521
ORF1ab/nsp31022T1022IaCtaTt22B.1.1.4200.002012
ORF1ab/nsp31022T1022IaCtaTt22B.1.1430.042553
ORF1ab/nsp31022T1022IaCtaTt22B.1.160.320.008584
ORF1ab/nsp31022T1022IaCtaTt22B.1.177.200.003035
ORF1ab/nsp31022T1022IaCtaTt22B.1.177.720.00678
ORF1ab/nsp31022T1022IaCtaTt22B.1.177.750.002081
ORF1ab/nsp31022T1022IaCtaTt22B.1.177.770.001452
ORF1ab/nsp31022T1022IaCtaTt22B.1.177.790.004684
ORF1ab/nsp31022T1022IaCtaTt22B.1.2340.000264
ORF1ab/nsp31022T1022IaCtaTt22B.1.2600.006689
ORF1ab/nsp31022T1022IaCtaTt22B.1.36.290.001035
ORF1ab/nsp31022T1022IaCtaTt22B.1.36.80.002
ORF1ab/nsp31022T1022IaCtaTt22B.1.3690.00057
ORF1ab/nsp31022T1022IaCtaTt22B.1.3750.001639
ORF1ab/nsp31022T1022IaCtaTt22B.1.5160.003914
ORF1ab/nsp31022T1022IaCtaTt22B.1.5600.009259
ORF1ab/nsp31022T1022IaCtaTt22B.1.575.10.004878
ORF1ab/nsp31022T1022IaCtaTt22B.1.5900.009091
ORF1ab/nsp31022T1022IaCtaTt22C.320.046512
ORF1ab/nsp31022T1022IaCtaTt22P.1.10.000635
ORF1ab/nsp31022T1022IaCtaTt22P.1.60.003891
ORF1ab/nsp31022T1022IaCtaTt11A.2.50.000499
ORF1ab/nsp31022T1022IaCtaTt11AD.20.000219
ORF1ab/nsp31022T1022IaCtaTt11AY.100.00053
ORF1ab/nsp31022T1022IaCtaTt11AY.1140.000231
ORF1ab/nsp31022T1022IaCtaTt11AY.220.002092
ORF1ab/nsp31022T1022IaCtaTt11AY.34.10.00051
ORF1ab/nsp31022T1022IaCtaTt11AY.380.000499
ORF1ab/nsp31022T1022IaCtaTt11AY.410.000294
ORF1ab/nsp31022T1022IaCtaTt11AY.46.10.001027
ORF1ab/nsp31022T1022IaCtaTt11AY.500.000799
ORF1ab/nsp31022T1022IaCtaTt11AY.520.000814
ORF1ab/nsp31022T1022IaCtaTt11AY.560.001605
ORF1ab/nsp31022T1022IaCtaTt11AY.590.00053
ORF1ab/nsp31022T1022IaCtaTt11AY.60.000041
ORF1ab/nsp31022T1022IaCtaTt11AY.690.000187
ORF1ab/nsp31022T1022IaCtaTt11AY.70.000196
ORF1ab/nsp31022T1022IaCtaTt11AY.700.000209
ORF1ab/nsp31022T1022IaCtaTt11AY.710.000475
ORF1ab/nsp31022T1022IaCtaTt11AY.740.000116
ORF1ab/nsp31022T1022IaCtaTt11AY.770.001127
ORF1ab/nsp31022T1022IaCtaTt11AY.850.000427
ORF1ab/nsp31022T1022IaCtaTt11AY.880.000884
ORF1ab/nsp31022T1022IaCtaTt11AY.980.000079
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.100.001115
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.2090.008929
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.2220.000204
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.250.000569
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.2940.001266
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.3060.000438
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.3170.000412
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.3540.004386
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.3560.008547
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.3760.005952
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.4160.000905
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.4320.001266
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.4340.000349
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.460.004367
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.620.027027
ORF1ab/nsp31022T1022IaCtaTt11B.1.1.630.000386
ORF1ab/nsp31022T1022IaCtaTt11B.1.1080.005814
ORF1ab/nsp31022T1022IaCtaTt11B.1.1100.004525
ORF1ab/nsp31022T1022IaCtaTt11B.1.1110.001175
ORF1ab/nsp31022T1022IaCtaTt11B.1.1280.000635
ORF1ab/nsp31022T1022IaCtaTt11B.1.1470.000756
ORF1ab/nsp31022T1022IaCtaTt11B.1.1570.002985
ORF1ab/nsp31022T1022IaCtaTt11B.1.1670.007812
ORF1ab/nsp31022T1022IaCtaTt11B.1.177.170.000821
ORF1ab/nsp31022T1022IaCtaTt11B.1.177.40.000211
ORF1ab/nsp31022T1022IaCtaTt11B.1.177.420.000894
ORF1ab/nsp31022T1022IaCtaTt11B.1.177.550.002331
ORF1ab/nsp31022T1022IaCtaTt11B.1.177.560.000668
ORF1ab/nsp31022T1022IaCtaTt11B.1.177.650.000665
ORF1ab/nsp31022T1022IaCtaTt11B.1.177.70.000165
ORF1ab/nsp31022T1022IaCtaTt11B.1.177.740.015152
ORF1ab/nsp31022T1022IaCtaTt11B.1.1920.009259
ORF1ab/nsp31022T1022IaCtaTt11B.1.2060.000816
ORF1ab/nsp31022T1022IaCtaTt11B.1.2140.003663
ORF1ab/nsp31022T1022IaCtaTt11B.1.2400.000216
ORF1ab/nsp31022T1022IaCtaTt11B.1.2410.000812
ORF1ab/nsp31022T1022IaCtaTt11B.1.2790.000514
ORF1ab/nsp31022T1022IaCtaTt11B.1.3350.010309
ORF1ab/nsp31022T1022IaCtaTt11B.1.3560.001727
ORF1ab/nsp31022T1022IaCtaTt11B.1.36.100.004785
ORF1ab/nsp31022T1022IaCtaTt11B.1.3610.001289
ORF1ab/nsp31022T1022IaCtaTt11B.1.3890.001002
ORF1ab/nsp31022T1022IaCtaTt11B.1.4280.00102
ORF1ab/nsp31022T1022IaCtaTt11B.1.4440.015873
ORF1ab/nsp31022T1022IaCtaTt11B.1.4590.004082
ORF1ab/nsp31022T1022IaCtaTt11B.1.4650.003802
ORF1ab/nsp31022T1022IaCtaTt11B.1.4970.000315
ORF1ab/nsp31022T1022IaCtaTt11B.1.5020.052632
ORF1ab/nsp31022T1022IaCtaTt11B.1.5410.004425
ORF1ab/nsp31022T1022IaCtaTt11B.1.5500.013699
ORF1ab/nsp31022T1022IaCtaTt11B.1.5520.015152
ORF1ab/nsp31022T1022IaCtaTt11B.1.5820.000491
ORF1ab/nsp31022T1022IaCtaTt11B.1.5850.027778
ORF1ab/nsp31022T1022IaCtaTt11B.1.5950.000261
ORF1ab/nsp31022T1022IaCtaTt11B.1.6060.006024
ORF1ab/nsp31022T1022IaCtaTt11B.1.6320.006711
ORF1ab/nsp31022T1022IaCtaTt11B.1.6360.006711
ORF1ab/nsp31022T1022IaCtaTt11B.1.6380.052632
ORF1ab/nsp31022T1022IaCtaTt11B.40.002208
ORF1ab/nsp31022T1022IaCtaTt11B.400.000364
ORF1ab/nsp31022T1022IaCtaTt11B.60.00091
ORF1ab/nsp31022T1022IaCtaTt11C.160.00106
ORF1ab/nsp31022T1022IaCtaTt11C.350.000774
ORF1ab/nsp31022T1022IaCtaTt11C.360.000911
ORF1ab/nsp31022T1022IaCtaTt11C.36.3.10.002717
ORF1ab/nsp31022T1022IaCtaTt11P.1.120.000484
ORF1ab/nsp31022T1022IaCtaTt11P.1.160.000374
ORF1ab/nsp31022T1022IaCtaTt11P.20.000187
ORF1ab/nsp31022T1022IaCtaTt11Q.40.000455
ORF1ab/nsp31022T1022IaCtaTt11Q.80.000165