CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S848del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3848S848del1S1666del1deltcTtc-420.55261-5263
ORF1ab/nsp3848S848del1S1666del1delTcTAc-410.255261-5263
ORF1ab/nsp3848S848del1S1666del1delTct-ct410.255261-5263

Details of the mutation S848del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3848S848del1tcTtc-24All0
ORF1ab/nsp3848S848del1TcTAc-14All0
ORF1ab/nsp3848S848del1Tct-ct14All0
ORF1ab/nsp3848S848del1tcTtc-12B.10.000009
ORF1ab/nsp3848S848del1Tct-ct12B.10.000009
ORF1ab/nsp3848S848del1tcTtc-11B.1.1.70.000001
ORF1ab/nsp3848S848del1TcTAc-11B.1.20.000009