CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S543F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3543S543FS1361FnonsyntCttTt93493414346-4348

Details of the mutation S543F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3543S543FtCttTt934934All0.000179
ORF1ab/nsp3543S543FtCttTt315315B.1.1.70.000282
ORF1ab/nsp3543S543FtCttTt6161AY.1030.000379
ORF1ab/nsp3543S543FtCttTt4949B.1.617.20.000185
ORF1ab/nsp3543S543FtCttTt4444AY.1200.001636
ORF1ab/nsp3543S543FtCttTt4141AY.40.000064
ORF1ab/nsp3543S543FtCttTt3232P.10.000504
ORF1ab/nsp3543S543FtCttTt2424B.1.20.000211
ORF1ab/nsp3543S543FtCttTt2323P.1.70.007344
ORF1ab/nsp3543S543FtCttTt2020AY.430.000089
ORF1ab/nsp3543S543FtCttTt1818AY.80.010909
ORF1ab/nsp3543S543FtCttTt1818B.1.4290.000424
ORF1ab/nsp3543S543FtCttTt1717AY.1020.000451
ORF1ab/nsp3543S543FtCttTt1515AY.250.00009
ORF1ab/nsp3543S543FtCttTt1515B.1.177.620.017878
ORF1ab/nsp3543S543FtCttTt1515B.1.36.290.00776
ORF1ab/nsp3543S543FtCttTt1313B.1.2210.000923
ORF1ab/nsp3543S543FtCttTt1313B.1.5250.001471
ORF1ab/nsp3543S543FtCttTt1212AY.4.20.00026
ORF1ab/nsp3543S543FtCttTt1212B.1.1770.000158
ORF1ab/nsp3543S543FtCttTt1111P.1.140.000526
ORF1ab/nsp3543S543FtCttTt99AY.1000.000414
ORF1ab/nsp3543S543FtCttTt99B.10.000082
ORF1ab/nsp3543S543FtCttTt88B.1.2580.000532
ORF1ab/nsp3543S543FtCttTt77AY.10.00277
ORF1ab/nsp3543S543FtCttTt77AY.30.00007
ORF1ab/nsp3543S543FtCttTt77AY.520.0057
ORF1ab/nsp3543S543FtCttTt77B.1.5260.000165
ORF1ab/nsp3543S543FtCttTt66AY.440.000037
ORF1ab/nsp3543S543FtCttTt66B.1.1.3690.002677
ORF1ab/nsp3543S543FtCttTt66B.1.258.170.000624
ORF1ab/nsp3543S543FtCttTt55AY.1190.000177
ORF1ab/nsp3543S543FtCttTt55AY.260.000142
ORF1ab/nsp3543S543FtCttTt55AY.50.000103
ORF1ab/nsp3543S543FtCttTt44AY.470.000124
ORF1ab/nsp3543S543FtCttTt44B.1.3510.000119
ORF1ab/nsp3543S543FtCttTt33AD.20.000657
ORF1ab/nsp3543S543FtCttTt33AY.4.40.001227
ORF1ab/nsp3543S543FtCttTt33B.1.10.000054
ORF1ab/nsp3543S543FtCttTt33B.1.3110.000824
ORF1ab/nsp3543S543FtCttTt33B.1.360.000438
ORF1ab/nsp3543S543FtCttTt22AY.100.00106
ORF1ab/nsp3543S543FtCttTt22AY.1180.000125
ORF1ab/nsp3543S543FtCttTt22AY.330.000134
ORF1ab/nsp3543S543FtCttTt22AY.390.000049
ORF1ab/nsp3543S543FtCttTt22AY.39.10.000079
ORF1ab/nsp3543S543FtCttTt22AY.410.000588
ORF1ab/nsp3543S543FtCttTt22AY.450.000243
ORF1ab/nsp3543S543FtCttTt22AY.490.00639
ORF1ab/nsp3543S543FtCttTt22AY.7.20.001119
ORF1ab/nsp3543S543FtCttTt22B.1.5640.000852
ORF1ab/nsp3543S543FtCttTt22W.10.017391
ORF1ab/nsp3543S543FtCttTt11A0.000387
ORF1ab/nsp3543S543FtCttTt11A.10.000282
ORF1ab/nsp3543S543FtCttTt11AY.1110.000183
ORF1ab/nsp3543S543FtCttTt11AY.1170.000085
ORF1ab/nsp3543S543FtCttTt11AY.1210.000135
ORF1ab/nsp3543S543FtCttTt11AY.130.000161
ORF1ab/nsp3543S543FtCttTt11AY.16.10.00047
ORF1ab/nsp3543S543FtCttTt11AY.20.000356
ORF1ab/nsp3543S543FtCttTt11AY.200.000039
ORF1ab/nsp3543S543FtCttTt11AY.230.00007
ORF1ab/nsp3543S543FtCttTt11AY.420.00004
ORF1ab/nsp3543S543FtCttTt11AY.580.000907
ORF1ab/nsp3543S543FtCttTt11AY.650.000533
ORF1ab/nsp3543S543FtCttTt11AY.670.000464
ORF1ab/nsp3543S543FtCttTt11AY.99.20.000092
ORF1ab/nsp3543S543FtCttTt11B.1.1.2140.000055
ORF1ab/nsp3543S543FtCttTt11B.1.1.4290.004608
ORF1ab/nsp3543S543FtCttTt11B.1.1.500.000679
ORF1ab/nsp3543S543FtCttTt11B.1.1260.001276
ORF1ab/nsp3543S543FtCttTt11B.1.177.210.000076
ORF1ab/nsp3543S543FtCttTt11B.1.177.600.000218
ORF1ab/nsp3543S543FtCttTt11B.1.214.20.0006
ORF1ab/nsp3543S543FtCttTt11B.1.351.20.000303
ORF1ab/nsp3543S543FtCttTt11B.1.351.50.0006
ORF1ab/nsp3543S543FtCttTt11B.1.3610.001289
ORF1ab/nsp3543S543FtCttTt11B.1.4090.000781
ORF1ab/nsp3543S543FtCttTt11B.1.466.10.007194
ORF1ab/nsp3543S543FtCttTt11B.1.4740.001901
ORF1ab/nsp3543S543FtCttTt11B.1.5850.027778
ORF1ab/nsp3543S543FtCttTt11B.1.5960.000087
ORF1ab/nsp3543S543FtCttTt11B.1.6090.000479
ORF1ab/nsp3543S543FtCttTt11B.400.000364
ORF1ab/nsp3543S543FtCttTt11D.20.000075
ORF1ab/nsp3543S543FtCttTt11P.1.100.000269