CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S371T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3371S371TS1189TnonsynaGcaCc12100.8333333830-3832
ORF1ab/nsp3371S371TS1189TnonsynaGCaCA1210.08333333830-3832
ORF1ab/nsp3371S371TS1189TnonsynaGCaCT1210.08333333830-3832

Details of the mutation S371T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3371S371TaGcaCc1012All0.000002
ORF1ab/nsp3371S371TaGCaCT112All0
ORF1ab/nsp3371S371TaGCaCA112All0
ORF1ab/nsp3371S371TaGcaCc33AY.40.000005
ORF1ab/nsp3371S371TaGCaCT12B.1.1.70.000001
ORF1ab/nsp3371S371TaGCaCA12B.1.1.70.000001
ORF1ab/nsp3371S371TaGcaCc11AY.200.000039
ORF1ab/nsp3371S371TaGcaCc11AY.4.20.000022
ORF1ab/nsp3371S371TaGcaCc11AY.620.000436
ORF1ab/nsp3371S371TaGcaCc11B.10.000009
ORF1ab/nsp3371S371TaGcaCc11B.1.20.000009
ORF1ab/nsp3371S371TaGcaCc11B.1.36.390.002217
ORF1ab/nsp3371S371TaGcaCc11B.580.010204