CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S370S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3370S370SS1188SsyntcAtcG2721430.5257353827-3829
ORF1ab/nsp3370S370SS1188SsyntcAtcC272850.31253827-3829
ORF1ab/nsp3370S370SS1188SsyntcAtcT272330.1213243827-3829
ORF1ab/nsp3370S370SS1188SsynTCAAGT272110.04044123827-3829

Details of the mutation S370S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3370S370StcAtcG143272All0.000027
ORF1ab/nsp3370S370StcAtcC85272All0.000016
ORF1ab/nsp3370S370StcAtcT33272All0.000006
ORF1ab/nsp3370S370STCAAGT11272All0.000002
ORF1ab/nsp3370S370StcAtcC6669B.10.000605
ORF1ab/nsp3370S370StcAtcG269B.10.000018
ORF1ab/nsp3370S370STCAAGT169B.10.000009
ORF1ab/nsp3370S370StcAtcG2646B.1.1.70.000023
ORF1ab/nsp3370S370STCAAGT946B.1.1.70.000008
ORF1ab/nsp3370S370StcAtcT846B.1.1.70.000007
ORF1ab/nsp3370S370StcAtcC346B.1.1.70.000003
ORF1ab/nsp3370S370StcAtcG2323B.1.1.5190.000913
ORF1ab/nsp3370S370StcAtcG1118AY.40.000017
ORF1ab/nsp3370S370StcAtcT718AY.40.000011
ORF1ab/nsp3370S370StcAtcG910AY.440.000055
ORF1ab/nsp3370S370StcAtcC110AY.440.000006
ORF1ab/nsp3370S370StcAtcT59AY.250.00003
ORF1ab/nsp3370S370StcAtcG49AY.250.000024
ORF1ab/nsp3370S370StcAtcC99B.1.177.730.005096
ORF1ab/nsp3370S370StcAtcT47AY.430.000018
ORF1ab/nsp3370S370StcAtcG27AY.430.000009
ORF1ab/nsp3370S370StcAtcC17AY.430.000004
ORF1ab/nsp3370S370StcAtcG66B.1.10.000109
ORF1ab/nsp3370S370StcAtcG35B.1.20.000026
ORF1ab/nsp3370S370StcAtcT15B.1.20.000009
ORF1ab/nsp3370S370StcAtcC15B.1.20.000009
ORF1ab/nsp3370S370StcAtcG35B.1.617.20.000011
ORF1ab/nsp3370S370StcAtcT25B.1.617.20.000008
ORF1ab/nsp3370S370StcAtcG55P.20.000933
ORF1ab/nsp3370S370StcAtcG44AY.1030.000025
ORF1ab/nsp3370S370StcAtcG44AY.50.000083
ORF1ab/nsp3370S370StcAtcG44C.370.000464
ORF1ab/nsp3370S370StcAtcG33B.1.1.280.000934
ORF1ab/nsp3370S370StcAtcG33B.1.6370.000219
ORF1ab/nsp3370S370StcAtcG22AY.4.2.10.000298
ORF1ab/nsp3370S370StcAtcG22AY.610.00021
ORF1ab/nsp3370S370StcAtcG22B.1.1.250.001137
ORF1ab/nsp3370S370StcAtcG22B.1.2340.000264
ORF1ab/nsp3370S370StcAtcG22B.1.36.80.002
ORF1ab/nsp3370S370StcAtcG22B.1.5260.000047
ORF1ab/nsp3370S370StcAtcC110.055556
ORF1ab/nsp3370S370StcAtcG11AY.1020.000027
ORF1ab/nsp3370S370StcAtcT11AY.1110.000183
ORF1ab/nsp3370S370StcAtcC11AY.200.000039
ORF1ab/nsp3370S370StcAtcG11AY.30.00001
ORF1ab/nsp3370S370StcAtcG11AY.340.000097
ORF1ab/nsp3370S370StcAtcT11AY.390.000025
ORF1ab/nsp3370S370StcAtcG11AY.4.30.000842
ORF1ab/nsp3370S370StcAtcG11AY.680.000274
ORF1ab/nsp3370S370StcAtcG11AY.7.10.000113
ORF1ab/nsp3370S370StcAtcG11AY.910.00073
ORF1ab/nsp3370S370StcAtcG11AY.980.000079
ORF1ab/nsp3370S370StcAtcC11AY.98.10.000048
ORF1ab/nsp3370S370StcAtcC11B0.000128
ORF1ab/nsp3370S370StcAtcG11B.1.1.2200.001859
ORF1ab/nsp3370S370StcAtcG11B.1.110.30.000718
ORF1ab/nsp3370S370StcAtcG11B.1.1390.000733
ORF1ab/nsp3370S370StcAtcG11B.1.177.230.003236
ORF1ab/nsp3370S370StcAtcT11B.1.177.40.000211
ORF1ab/nsp3370S370StcAtcG11B.1.2430.00007
ORF1ab/nsp3370S370StcAtcG11B.1.3510.00003
ORF1ab/nsp3370S370StcAtcG11B.1.36.100.004785
ORF1ab/nsp3370S370StcAtcG11B.1.3670.000792
ORF1ab/nsp3370S370StcAtcG11B.1.4290.000024
ORF1ab/nsp3370S370STCAAGT11B.1.5760.000907
ORF1ab/nsp3370S370StcAtcT11B.1.6280.000352
ORF1ab/nsp3370S370StcAtcG11B.400.000364
ORF1ab/nsp3370S370StcAtcG11D.20.000075
ORF1ab/nsp3370S370StcAtcT11N.50.001767
ORF1ab/nsp3370S370StcAtcT11Q.10.000126