CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S20I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp320S20IS838InonsynaGtaTt15315312777-2779

Details of the mutation S20I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp320S20IaGtaTt153153All0.000029
ORF1ab/nsp320S20IaGtaTt3838B.1.258.150.716981
ORF1ab/nsp320S20IaGtaTt2121B.1.617.10.002708
ORF1ab/nsp320S20IaGtaTt1212B.1.1.70.000011
ORF1ab/nsp320S20IaGtaTt1010B.1.4290.000235
ORF1ab/nsp320S20IaGtaTt88B.1.5610.003176
ORF1ab/nsp320S20IaGtaTt77AY.40.000011
ORF1ab/nsp320S20IaGtaTt66AY.1030.000037
ORF1ab/nsp320S20IaGtaTt55B.1.617.20.000019
ORF1ab/nsp320S20IaGtaTt44AY.430.000018
ORF1ab/nsp320S20IaGtaTt44B.1.1770.000053
ORF1ab/nsp320S20IaGtaTt44B.1.5260.000094
ORF1ab/nsp320S20IaGtaTt33AY.250.000018
ORF1ab/nsp320S20IaGtaTt33AY.330.0002
ORF1ab/nsp320S20IaGtaTt33B.10.000027
ORF1ab/nsp320S20IaGtaTt22AY.390.000049
ORF1ab/nsp320S20IaGtaTt22AY.4.10.001475
ORF1ab/nsp320S20IaGtaTt22B.1.10.000036
ORF1ab/nsp320S20IaGtaTt22B.1.177.120.000303
ORF1ab/nsp320S20IaGtaTt22P.10.000032
ORF1ab/nsp320S20IaGtaTt110.055556
ORF1ab/nsp320S20IaGtaTt11AY.1010.00049
ORF1ab/nsp320S20IaGtaTt11AY.1110.000183
ORF1ab/nsp320S20IaGtaTt11AY.1200.000037
ORF1ab/nsp320S20IaGtaTt11AY.20.000356
ORF1ab/nsp320S20IaGtaTt11AY.30.00001
ORF1ab/nsp320S20IaGtaTt11AY.980.000079
ORF1ab/nsp320S20IaGtaTt11B.1.177.430.001477
ORF1ab/nsp320S20IaGtaTt11B.1.20.000009
ORF1ab/nsp320S20IaGtaTt11B.1.2340.000132
ORF1ab/nsp320S20IaGtaTt11B.1.466.20.000391
ORF1ab/nsp320S20IaGtaTt11B.40.002208
ORF1ab/nsp320S20IaGtaTt11B.6.10.026316
ORF1ab/nsp320S20IaGtaTt11D.20.000075
ORF1ab/nsp320S20IaGtaTt11Q.10.000126