CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1781S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31781S1781SS2599SsyntcAtcG290228740.9903518060-8062
ORF1ab/nsp31781S1781SS2599SsyntcAtcT2902160.005513448060-8062
ORF1ab/nsp31781S1781SS2599SsyntcAtcC2902120.004135088060-8062

Details of the mutation S1781S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31781S1781StcAtcG28742902All0.00055
ORF1ab/nsp31781S1781StcAtcT162902All0.000003
ORF1ab/nsp31781S1781StcAtcC122902All0.000002
ORF1ab/nsp31781S1781StcAtcG16451645AY.10.65097
ORF1ab/nsp31781S1781StcAtcG506506AY.60.020811
ORF1ab/nsp31781S1781StcAtcG9494AY.340.009115
ORF1ab/nsp31781S1781StcAtcG7576B.1.617.20.000282
ORF1ab/nsp31781S1781StcAtcC176B.1.617.20.000004
ORF1ab/nsp31781S1781StcAtcG6666B.1.3510.001962
ORF1ab/nsp31781S1781StcAtcG4444AY.40.000068
ORF1ab/nsp31781S1781StcAtcG3643B.1.1.70.000032
ORF1ab/nsp31781S1781StcAtcT443B.1.1.70.000004
ORF1ab/nsp31781S1781StcAtcC343B.1.1.70.000003
ORF1ab/nsp31781S1781StcAtcG4141B.1.4270.00207
ORF1ab/nsp31781S1781StcAtcG3939AY.690.00728
ORF1ab/nsp31781S1781StcAtcG3737AY.1170.003127
ORF1ab/nsp31781S1781StcAtcG3030AY.430.000133
ORF1ab/nsp31781S1781StcAtcG2020B.1.6270.040404
ORF1ab/nsp31781S1781StcAtcG1616AY.30.000159
ORF1ab/nsp31781S1781StcAtcG1515AY.390.000371
ORF1ab/nsp31781S1781StcAtcG914P.10.000142
ORF1ab/nsp31781S1781StcAtcC514P.10.000079
ORF1ab/nsp31781S1781StcAtcG1313AY.980.001027
ORF1ab/nsp31781S1781StcAtcG1111B.1.177.641
ORF1ab/nsp31781S1781StcAtcG1010AY.330.000668
ORF1ab/nsp31781S1781StcAtcG910AY.440.000055
ORF1ab/nsp31781S1781StcAtcC110AY.440.000006
ORF1ab/nsp31781S1781StcAtcG99B.1.2210.000639
ORF1ab/nsp31781S1781StcAtcG88AY.250.000048
ORF1ab/nsp31781S1781StcAtcG78B.10.000064
ORF1ab/nsp31781S1781StcAtcT18B.10.000009
ORF1ab/nsp31781S1781StcAtcG77AY.50.000145
ORF1ab/nsp31781S1781StcAtcG77B.1.10.000127
ORF1ab/nsp31781S1781StcAtcT77B.1.1.3050.027027
ORF1ab/nsp31781S1781StcAtcG66AY.1180.000376
ORF1ab/nsp31781S1781StcAtcG55AY.4.10.003687
ORF1ab/nsp31781S1781StcAtcG55AY.90.000338
ORF1ab/nsp31781S1781StcAtcG44AY.1030.000025
ORF1ab/nsp31781S1781StcAtcG44AY.260.000113
ORF1ab/nsp31781S1781StcAtcG44AY.460.000416
ORF1ab/nsp31781S1781StcAtcG44AY.620.001743
ORF1ab/nsp31781S1781StcAtcG34B.1.20.000026
ORF1ab/nsp31781S1781StcAtcT14B.1.20.000009
ORF1ab/nsp31781S1781StcAtcG44C.370.000464
ORF1ab/nsp31781S1781StcAtcG23AY.1020.000053
ORF1ab/nsp31781S1781StcAtcC13AY.1020.000027
ORF1ab/nsp31781S1781StcAtcG33AY.1050.001929
ORF1ab/nsp31781S1781StcAtcG33AY.1200.000112
ORF1ab/nsp31781S1781StcAtcG33AY.290.000047
ORF1ab/nsp31781S1781StcAtcG33AY.9.20.00011
ORF1ab/nsp31781S1781StcAtcG33AY.920.000862
ORF1ab/nsp31781S1781StcAtcG22AY.1130.000285
ORF1ab/nsp31781S1781StcAtcG22AY.130.000322
ORF1ab/nsp31781S1781StcAtcG12AY.190.00114
ORF1ab/nsp31781S1781StcAtcT12AY.190.00114
ORF1ab/nsp31781S1781StcAtcG22AY.230.000139
ORF1ab/nsp31781S1781StcAtcG22AY.450.000243
ORF1ab/nsp31781S1781StcAtcG22AY.670.000929
ORF1ab/nsp31781S1781StcAtcG22AY.750.000112
ORF1ab/nsp31781S1781StcAtcG22AY.840.000875
ORF1ab/nsp31781S1781StcAtcG22AY.850.000854
ORF1ab/nsp31781S1781StcAtcG22AY.9.10.000167
ORF1ab/nsp31781S1781StcAtcG22B0.000256
ORF1ab/nsp31781S1781StcAtcG22B.1.3610.002577
ORF1ab/nsp31781S1781StcAtcG22B.1.5460.007407
ORF1ab/nsp31781S1781StcAtcG22B.1.6370.000146
ORF1ab/nsp31781S1781StcAtcG22P.1.10.10.01626
ORF1ab/nsp31781S1781StcAtcG11AY.1000.000046
ORF1ab/nsp31781S1781StcAtcG11AY.1040.001984
ORF1ab/nsp31781S1781StcAtcG11AY.1160.000287
ORF1ab/nsp31781S1781StcAtcG11AY.1190.000035
ORF1ab/nsp31781S1781StcAtcG11AY.120.000316
ORF1ab/nsp31781S1781StcAtcG11AY.1210.000135
ORF1ab/nsp31781S1781StcAtcG11AY.160.00038
ORF1ab/nsp31781S1781StcAtcG11AY.200.000039
ORF1ab/nsp31781S1781StcAtcG11AY.220.002092
ORF1ab/nsp31781S1781StcAtcG11AY.34.10.00051
ORF1ab/nsp31781S1781StcAtcG11AY.4.50.000107
ORF1ab/nsp31781S1781StcAtcG11AY.46.40.000165
ORF1ab/nsp31781S1781StcAtcG11AY.46.50.000198
ORF1ab/nsp31781S1781StcAtcG11AY.46.60.000072
ORF1ab/nsp31781S1781StcAtcG11AY.470.000031
ORF1ab/nsp31781S1781StcAtcG11AY.5.30.000337
ORF1ab/nsp31781S1781StcAtcG11AY.650.000533
ORF1ab/nsp31781S1781StcAtcG11AY.730.000665
ORF1ab/nsp31781S1781StcAtcG11AY.770.001127
ORF1ab/nsp31781S1781StcAtcG11AY.780.001541
ORF1ab/nsp31781S1781StcAtcG11AY.820.001357
ORF1ab/nsp31781S1781StcAtcG11AY.870.000833
ORF1ab/nsp31781S1781StcAtcG11AY.950.000761
ORF1ab/nsp31781S1781StcAtcG11B.1.1.3260.001761
ORF1ab/nsp31781S1781StcAtcG11B.1.1.330.000421
ORF1ab/nsp31781S1781StcAtcT11B.1.1.370.000193
ORF1ab/nsp31781S1781StcAtcG11B.1.1.5190.00004
ORF1ab/nsp31781S1781StcAtcG11B.1.1390.000733
ORF1ab/nsp31781S1781StcAtcG11B.1.1570.002985
ORF1ab/nsp31781S1781StcAtcG11B.1.1600.000031
ORF1ab/nsp31781S1781StcAtcG11B.1.160.260.002421
ORF1ab/nsp31781S1781StcAtcG11B.1.351.20.000303
ORF1ab/nsp31781S1781StcAtcG11B.1.4090.000781
ORF1ab/nsp31781S1781StcAtcG11B.1.5250.000113
ORF1ab/nsp31781S1781StcAtcG11B.1.6280.000352
ORF1ab/nsp31781S1781StcAtcT11B.40.002208
ORF1ab/nsp31781S1781StcAtcG11B.6.60.000889
ORF1ab/nsp31781S1781StcAtcC11P.1.170.000162