CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1734del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31734S1734del1S2552del1deltcAtc-750.7142867919-7921
ORF1ab/nsp31734S1734del1S2552del1delTCA-NN710.1428577919-7921
ORF1ab/nsp31734S1734del1S2552del1delTca-ca710.1428577919-7921

Details of the mutation S1734del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31734S1734del1tcAtc-57All0.000001
ORF1ab/nsp31734S1734del1TCA-NN17All0
ORF1ab/nsp31734S1734del1Tca-ca17All0
ORF1ab/nsp31734S1734del1tcAtc-22B.1.1.70.000002
ORF1ab/nsp31734S1734del1Tca-ca11AY.360.000148
ORF1ab/nsp31734S1734del1tcAtc-11AY.40.000002
ORF1ab/nsp31734S1734del1tcAtc-11AY.4.50.000107
ORF1ab/nsp31734S1734del1TCA-NN11AY.430.000004
ORF1ab/nsp31734S1734del1tcAtc-11B0.000128