CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1734P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31734S1734PS2552PnonsynTcaCca112411230.999117919-7921
ORF1ab/nsp31734S1734PS2552PnonsynTcACcG112410.000889687919-7921

Details of the mutation S1734P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31734S1734PTcaCca11231124All0.000215
ORF1ab/nsp31734S1734PTcACcG11124All0
ORF1ab/nsp31734S1734PTcaCca351352B.1.1.70.000314
ORF1ab/nsp31734S1734PTcACcG1352B.1.1.70.000001
ORF1ab/nsp31734S1734PTcaCca334334AY.1030.002074
ORF1ab/nsp31734S1734PTcaCca118118AY.40.000184
ORF1ab/nsp31734S1734PTcaCca6161B.1.1.1630.465649
ORF1ab/nsp31734S1734PTcaCca3535B.1.20.000308
ORF1ab/nsp31734S1734PTcaCca2929AY.4.50.003117
ORF1ab/nsp31734S1734PTcaCca2828B.1.617.20.000105
ORF1ab/nsp31734S1734PTcaCca2020B.1.10.000363
ORF1ab/nsp31734S1734PTcaCca1414AY.30.000139
ORF1ab/nsp31734S1734PTcaCca1010B.10.000092
ORF1ab/nsp31734S1734PTcaCca99AY.1210.001218
ORF1ab/nsp31734S1734PTcaCca88AY.250.000048
ORF1ab/nsp31734S1734PTcaCca77AY.99.20.000645
ORF1ab/nsp31734S1734PTcaCca66B.1.6370.000438
ORF1ab/nsp31734S1734PTcaCca55A.2.50.002495
ORF1ab/nsp31734S1734PTcaCca55AY.70.00098
ORF1ab/nsp31734S1734PTcaCca55P.10.000079
ORF1ab/nsp31734S1734PTcaCca44AY.1190.000141
ORF1ab/nsp31734S1734PTcaCca44AY.430.000018
ORF1ab/nsp31734S1734PTcaCca44AY.440.000024
ORF1ab/nsp31734S1734PTcaCca44AY.470.000124
ORF1ab/nsp31734S1734PTcaCca44B.1.2400.000862
ORF1ab/nsp31734S1734PTcaCca44B.1.5250.000453
ORF1ab/nsp31734S1734PTcaCca33AY.4.2.10.000447
ORF1ab/nsp31734S1734PTcaCca33B.1.5610.001191
ORF1ab/nsp31734S1734PTcaCca22AY.1200.000074
ORF1ab/nsp31734S1734PTcaCca22AY.20.000712
ORF1ab/nsp31734S1734PTcaCca22AY.200.000078
ORF1ab/nsp31734S1734PTcaCca22AY.290.000032
ORF1ab/nsp31734S1734PTcaCca22AY.39.10.000079
ORF1ab/nsp31734S1734PTcaCca22AY.50.000041
ORF1ab/nsp31734S1734PTcaCca22B.1.177.120.000303
ORF1ab/nsp31734S1734PTcaCca22B.1.177.860.000367
ORF1ab/nsp31734S1734PTcaCca22B.1.6090.000959
ORF1ab/nsp31734S1734PTcaCca22D.20.00015
ORF1ab/nsp31734S1734PTcaCca11AY.1000.000046
ORF1ab/nsp31734S1734PTcaCca11AY.1020.000027
ORF1ab/nsp31734S1734PTcaCca11AY.1170.000085
ORF1ab/nsp31734S1734PTcaCca11AY.160.00038
ORF1ab/nsp31734S1734PTcaCca11AY.240.000431
ORF1ab/nsp31734S1734PTcaCca11AY.330.000067
ORF1ab/nsp31734S1734PTcaCca11AY.340.000097
ORF1ab/nsp31734S1734PTcaCca11AY.370.000316
ORF1ab/nsp31734S1734PTcaCca11AY.39.20.001541
ORF1ab/nsp31734S1734PTcaCca11AY.420.00004
ORF1ab/nsp31734S1734PTcaCca11AY.5.30.000337
ORF1ab/nsp31734S1734PTcaCca11AY.5.40.000277
ORF1ab/nsp31734S1734PTcaCca11AY.570.000656
ORF1ab/nsp31734S1734PTcaCca11B.1.1.1640.005155
ORF1ab/nsp31734S1734PTcaCca11B.1.1.3060.000438
ORF1ab/nsp31734S1734PTcaCca11B.1.1.5170.006803
ORF1ab/nsp31734S1734PTcaCca11B.1.1770.000013
ORF1ab/nsp31734S1734PTcaCca11B.1.177.310.011494
ORF1ab/nsp31734S1734PTcaCca11B.1.177.770.000726
ORF1ab/nsp31734S1734PTcaCca11B.1.177.870.000728
ORF1ab/nsp31734S1734PTcaCca11B.1.36.290.000517
ORF1ab/nsp31734S1734PTcaCca11B.1.3960.000706
ORF1ab/nsp31734S1734PTcaCca11B.1.4290.000024
ORF1ab/nsp31734S1734PTcaCca11B.1.5820.000491
ORF1ab/nsp31734S1734PTcaCca11B.1.6120.002653
ORF1ab/nsp31734S1734PTcaCca11B.1.6210.000089
ORF1ab/nsp31734S1734PTcaCca11C.370.000116
ORF1ab/nsp31734S1734PTcaCca11C.37.10.002618