CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1734L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31734S1734LS2552LnonsyntCatTa23210.9130437919-7921
ORF1ab/nsp31734S1734LS2552LnonsynTCaCTa2320.08695657919-7921

Details of the mutation S1734L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31734S1734LtCatTa2123All0.000004
ORF1ab/nsp31734S1734LTCaCTa223All0
ORF1ab/nsp31734S1734LtCatTa33B.10.000027
ORF1ab/nsp31734S1734LTCaCTa220.111111
ORF1ab/nsp31734S1734LtCatTa22AY.1000.000092
ORF1ab/nsp31734S1734LtCatTa22B.1.1.70.000002
ORF1ab/nsp31734S1734LtCatTa22B.1.20.000018
ORF1ab/nsp31734S1734LtCatTa11A.20.000662
ORF1ab/nsp31734S1734LtCatTa11A.2.20.001689
ORF1ab/nsp31734S1734LtCatTa11AY.1030.000006
ORF1ab/nsp31734S1734LtCatTa11AY.250.000006
ORF1ab/nsp31734S1734LtCatTa11AY.40.000002
ORF1ab/nsp31734S1734LtCatTa11AY.420.00004
ORF1ab/nsp31734S1734LtCatTa11AY.46.60.000072
ORF1ab/nsp31734S1734LtCatTa11B.1.1.1640.005155
ORF1ab/nsp31734S1734LtCatTa11B.1.1.2260.005814
ORF1ab/nsp31734S1734LtCatTa11B.1.177.870.000728
ORF1ab/nsp31734S1734LtCatTa11B.1.2060.000816
ORF1ab/nsp31734S1734LtCatTa11Q.80.000165