CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1699P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31699S1699PS2517PnonsynTctCct1054105417814-7816

Details of the mutation S1699P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31699S1699PTctCct10541054All0.000202
ORF1ab/nsp31699S1699PTctCct861861AY.40.00134
ORF1ab/nsp31699S1699PTctCct3636B.1.1680.972973
ORF1ab/nsp31699S1699PTctCct3232B.1.1.70.000029
ORF1ab/nsp31699S1699PTctCct1919B.10.000174
ORF1ab/nsp31699S1699PTctCct1717B.1.20.00015
ORF1ab/nsp31699S1699PTctCct99AY.650.004797
ORF1ab/nsp31699S1699PTctCct99B.1.3240.014446
ORF1ab/nsp31699S1699PTctCct88B.1.36.220.009662
ORF1ab/nsp31699S1699PTctCct77B.1.617.20.000026
ORF1ab/nsp31699S1699PTctCct66AM.40.021429
ORF1ab/nsp31699S1699PTctCct55B.1.1770.000066
ORF1ab/nsp31699S1699PTctCct33AY.430.000013
ORF1ab/nsp31699S1699PTctCct33AY.60.000123
ORF1ab/nsp31699S1699PTctCct22AY.1000.000092
ORF1ab/nsp31699S1699PTctCct22AY.1030.000012
ORF1ab/nsp31699S1699PTctCct22AY.30.00002
ORF1ab/nsp31699S1699PTctCct22AY.320.001065
ORF1ab/nsp31699S1699PTctCct22B.1.3510.000059
ORF1ab/nsp31699S1699PTctCct22B.1.5260.000047
ORF1ab/nsp31699S1699PTctCct11AY.1140.000231
ORF1ab/nsp31699S1699PTctCct11AY.1190.000035
ORF1ab/nsp31699S1699PTctCct11AY.130.000161
ORF1ab/nsp31699S1699PTctCct11AY.250.000006
ORF1ab/nsp31699S1699PTctCct11AY.350.000233
ORF1ab/nsp31699S1699PTctCct11AY.420.00004
ORF1ab/nsp31699S1699PTctCct11AY.440.000006
ORF1ab/nsp31699S1699PTctCct11AY.470.000031
ORF1ab/nsp31699S1699PTctCct11AY.50.000021
ORF1ab/nsp31699S1699PTctCct11AY.670.000464
ORF1ab/nsp31699S1699PTctCct11AY.9.10.000084
ORF1ab/nsp31699S1699PTctCct11B0.000128
ORF1ab/nsp31699S1699PTctCct11B.1.1.2430.004082
ORF1ab/nsp31699S1699PTctCct11B.1.1.2840.000107
ORF1ab/nsp31699S1699PTctCct11B.1.1.370.000193
ORF1ab/nsp31699S1699PTctCct11B.1.1.390.00051
ORF1ab/nsp31699S1699PTctCct11B.1.1.700.000341
ORF1ab/nsp31699S1699PTctCct11B.1.221.30.000833
ORF1ab/nsp31699S1699PTctCct11B.1.258.30.001675
ORF1ab/nsp31699S1699PTctCct11B.1.3950.007042
ORF1ab/nsp31699S1699PTctCct11B.1.3980.002976
ORF1ab/nsp31699S1699PTctCct11B.1.4110.003704
ORF1ab/nsp31699S1699PTctCct11B.1.4290.000024
ORF1ab/nsp31699S1699PTctCct11B.1.4990.00105
ORF1ab/nsp31699S1699PTctCct11B.1.5880.00091
ORF1ab/nsp31699S1699PTctCct11B.1.617.10.000129
ORF1ab/nsp31699S1699PTctCct11D.20.000075