CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1615P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31615S1615PS2433PnonsynTccCcc1351340.9925937562-7564
ORF1ab/nsp31615S1615PS2433PnonsynTcCCcT13510.007407417562-7564

Details of the mutation S1615P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31615S1615PTccCcc134135All0.000026
ORF1ab/nsp31615S1615PTcCCcT1135All0
ORF1ab/nsp31615S1615PTccCcc3737AY.200.001438
ORF1ab/nsp31615S1615PTccCcc2020B.1.1.70.000018
ORF1ab/nsp31615S1615PTccCcc1212B.1.617.20.000045
ORF1ab/nsp31615S1615PTccCcc1111AY.440.000067
ORF1ab/nsp31615S1615PTccCcc99B.10.000082
ORF1ab/nsp31615S1615PTccCcc77AY.430.000031
ORF1ab/nsp31615S1615PTccCcc66AY.40.000009
ORF1ab/nsp31615S1615PTccCcc33AY.1030.000019
ORF1ab/nsp31615S1615PTccCcc33B.1.20.000026
ORF1ab/nsp31615S1615PTccCcc12B.1.1770.000013
ORF1ab/nsp31615S1615PTcCCcT12B.1.1770.000013
ORF1ab/nsp31615S1615PTccCcc22D.20.00015
ORF1ab/nsp31615S1615PTccCcc11A0.000387
ORF1ab/nsp31615S1615PTccCcc11AY.1020.000027
ORF1ab/nsp31615S1615PTccCcc11AY.1130.000142
ORF1ab/nsp31615S1615PTccCcc11AY.1180.000063
ORF1ab/nsp31615S1615PTccCcc11AY.1200.000037
ORF1ab/nsp31615S1615PTccCcc11AY.230.00007
ORF1ab/nsp31615S1615PTccCcc11AY.250.000006
ORF1ab/nsp31615S1615PTccCcc11AY.4.2.10.000149
ORF1ab/nsp31615S1615PTccCcc11AY.700.000209
ORF1ab/nsp31615S1615PTccCcc11B.1.1.390.00051
ORF1ab/nsp31615S1615PTccCcc11B.1.1.4850.016667
ORF1ab/nsp31615S1615PTccCcc11B.1.1.5190.00004
ORF1ab/nsp31615S1615PTccCcc11B.1.1600.000031
ORF1ab/nsp31615S1615PTccCcc11B.1.160.320.004292
ORF1ab/nsp31615S1615PTccCcc11B.1.177.210.000076
ORF1ab/nsp31615S1615PTccCcc11B.1.177.440.000519
ORF1ab/nsp31615S1615PTccCcc11B.1.3360.002439
ORF1ab/nsp31615S1615PTccCcc11B.1.4700.001404
ORF1ab/nsp31615S1615PTccCcc11B.1.5610.000397
ORF1ab/nsp31615S1615PTccCcc11B.1.5950.000261
ORF1ab/nsp31615S1615PTccCcc11B.1.6210.000089
ORF1ab/nsp31615S1615PTccCcc11P.10.000016
ORF1ab/nsp31615S1615PTccCcc11P.1.140.000048