CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1578I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31578S1578IS2396InonsynaGtaTt4514451417451-7453

Details of the mutation S1578I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31578S1578IaGtaTt45144514All0.000863
ORF1ab/nsp31578S1578IaGtaTt16531653B.1.1.3170.680527
ORF1ab/nsp31578S1578IaGtaTt14341434AY.30.014263
ORF1ab/nsp31578S1578IaGtaTt285285B.1.617.20.001073
ORF1ab/nsp31578S1578IaGtaTt122122AY.1050.078457
ORF1ab/nsp31578S1578IaGtaTt118118AY.420.004747
ORF1ab/nsp31578S1578IaGtaTt106106B.1.1.70.000095
ORF1ab/nsp31578S1578IaGtaTt101101AY.1020.002678
ORF1ab/nsp31578S1578IaGtaTt7979AY.250.000475
ORF1ab/nsp31578S1578IaGtaTt6464AS.21
ORF1ab/nsp31578S1578IaGtaTt5454AY.1160.015486
ORF1ab/nsp31578S1578IaGtaTt5151AY.40.000079
ORF1ab/nsp31578S1578IaGtaTt4848B.1.10.000871
ORF1ab/nsp31578S1578IaGtaTt4646B.10.000421
ORF1ab/nsp31578S1578IaGtaTt2929AY.390.000717
ORF1ab/nsp31578S1578IaGtaTt2727B.1.5950.007046
ORF1ab/nsp31578S1578IaGtaTt2020AY.430.000089
ORF1ab/nsp31578S1578IaGtaTt1919AY.680.005201
ORF1ab/nsp31578S1578IaGtaTt1919AY.850.008116
ORF1ab/nsp31578S1578IaGtaTt1818B.1.1.1890.027231
ORF1ab/nsp31578S1578IaGtaTt1717AY.440.000103
ORF1ab/nsp31578S1578IaGtaTt1717B.1.6330.708333
ORF1ab/nsp31578S1578IaGtaTt1515P.10.000236
ORF1ab/nsp31578S1578IaGtaTt1313AY.1030.000081
ORF1ab/nsp31578S1578IaGtaTt1313AY.1170.001099
ORF1ab/nsp31578S1578IaGtaTt99AY.46.20.005718
ORF1ab/nsp31578S1578IaGtaTt99AY.910.006574
ORF1ab/nsp31578S1578IaGtaTt99B.1.20.000079
ORF1ab/nsp31578S1578IaGtaTt88AY.630.003095
ORF1ab/nsp31578S1578IaGtaTt77AY.460.000729
ORF1ab/nsp31578S1578IaGtaTt66B.1.1390.004399
ORF1ab/nsp31578S1578IaGtaTt55AY.1200.000186
ORF1ab/nsp31578S1578IaGtaTt55AY.5.30.001687
ORF1ab/nsp31578S1578IaGtaTt55B.1.1.2770.003794
ORF1ab/nsp31578S1578IaGtaTt44AY.260.000113
ORF1ab/nsp31578S1578IaGtaTt44B.1.1.2530.010025
ORF1ab/nsp31578S1578IaGtaTt44B.1.1.260.020942
ORF1ab/nsp31578S1578IaGtaTt33AY.450.000365
ORF1ab/nsp31578S1578IaGtaTt33AY.750.000168
ORF1ab/nsp31578S1578IaGtaTt33AY.75.10.000541
ORF1ab/nsp31578S1578IaGtaTt33B.1.1100.013575
ORF1ab/nsp31578S1578IaGtaTt33B.1.3460.003932
ORF1ab/nsp31578S1578IaGtaTt33B.1.4000.001287
ORF1ab/nsp31578S1578IaGtaTt33P.1.140.000143
ORF1ab/nsp31578S1578IaGtaTt22AY.1180.000125
ORF1ab/nsp31578S1578IaGtaTt22AY.230.000139
ORF1ab/nsp31578S1578IaGtaTt22AY.360.000296
ORF1ab/nsp31578S1578IaGtaTt22AY.370.000632
ORF1ab/nsp31578S1578IaGtaTt22AY.50.000041
ORF1ab/nsp31578S1578IaGtaTt22AY.9.10.000167
ORF1ab/nsp31578S1578IaGtaTt22AY.920.000575
ORF1ab/nsp31578S1578IaGtaTt22B.1.1.330.000842
ORF1ab/nsp31578S1578IaGtaTt22B.1.1.3700.025316
ORF1ab/nsp31578S1578IaGtaTt22B.1.1.5210.010695
ORF1ab/nsp31578S1578IaGtaTt22B.1.4270.000101
ORF1ab/nsp31578S1578IaGtaTt11A.2.50.000499
ORF1ab/nsp31578S1578IaGtaTt11AY.1060.000335
ORF1ab/nsp31578S1578IaGtaTt11AY.1190.000035
ORF1ab/nsp31578S1578IaGtaTt11AY.200.000039
ORF1ab/nsp31578S1578IaGtaTt11AY.270.000065
ORF1ab/nsp31578S1578IaGtaTt11AY.290.000016
ORF1ab/nsp31578S1578IaGtaTt11AY.470.000031
ORF1ab/nsp31578S1578IaGtaTt11AY.60.000041
ORF1ab/nsp31578S1578IaGtaTt11AY.840.000437
ORF1ab/nsp31578S1578IaGtaTt11AY.880.000884
ORF1ab/nsp31578S1578IaGtaTt11AY.940.000443
ORF1ab/nsp31578S1578IaGtaTt11AY.950.000761
ORF1ab/nsp31578S1578IaGtaTt11B0.000128
ORF1ab/nsp31578S1578IaGtaTt11B.1.1.100.001115
ORF1ab/nsp31578S1578IaGtaTt11B.1.1.1980.001468
ORF1ab/nsp31578S1578IaGtaTt11B.1.1.2220.000204
ORF1ab/nsp31578S1578IaGtaTt11B.1.1.3360.016667
ORF1ab/nsp31578S1578IaGtaTt11B.1.1.3690.000446
ORF1ab/nsp31578S1578IaGtaTt11B.1.1.3890.006061
ORF1ab/nsp31578S1578IaGtaTt11B.1.1600.000031
ORF1ab/nsp31578S1578IaGtaTt11B.1.177.770.000726
ORF1ab/nsp31578S1578IaGtaTt11B.1.2340.000132
ORF1ab/nsp31578S1578IaGtaTt11B.1.3510.00003
ORF1ab/nsp31578S1578IaGtaTt11B.1.4700.001404
ORF1ab/nsp31578S1578IaGtaTt11B.1.5580.004566
ORF1ab/nsp31578S1578IaGtaTt11B.1.6230.000536
ORF1ab/nsp31578S1578IaGtaTt11D.20.000075
ORF1ab/nsp31578S1578IaGtaTt11P.1.120.000484