CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1467F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31467S1467FS2285FnonsyntCttTt493449320.9995957118-7120
ORF1ab/nsp31467S1467FS2285FnonsyntCTtTC493420.0004053517118-7120

Details of the mutation S1467F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31467S1467FtCttTt49324934All0.000943
ORF1ab/nsp31467S1467FtCTtTC24934All0
ORF1ab/nsp31467S1467FtCttTt921921B.1.1.70.000825
ORF1ab/nsp31467S1467FtCttTt913913AY.40.001421
ORF1ab/nsp31467S1467FtCttTt605605AY.46.60.043685
ORF1ab/nsp31467S1467FtCttTt220221B.1.617.20.000828
ORF1ab/nsp31467S1467FtCTtTC1221B.1.617.20.000004
ORF1ab/nsp31467S1467FtCttTt177177AY.30.001761
ORF1ab/nsp31467S1467FtCttTt158158AY.290.002492
ORF1ab/nsp31467S1467FtCttTt104104B.1.20.000916
ORF1ab/nsp31467S1467FtCttTt9595AY.430.000421
ORF1ab/nsp31467S1467FtCttTt9393AY.1030.000577
ORF1ab/nsp31467S1467FtCttTt8686AY.250.000517
ORF1ab/nsp31467S1467FtCttTt8383AY.440.000505
ORF1ab/nsp31467S1467FtCttTt8282B.10.000751
ORF1ab/nsp31467S1467FtCttTt8080B.1.177.210.006118
ORF1ab/nsp31467S1467FtCttTt7979B.1.4290.001859
ORF1ab/nsp31467S1467FtCttTt6060B.1.3510.001784
ORF1ab/nsp31467S1467FtCttTt4848AY.4.20.001041
ORF1ab/nsp31467S1467FtCttTt4242B.1.4970.01322
ORF1ab/nsp31467S1467FtCttTt4141AY.3.10.003496
ORF1ab/nsp31467S1467FtCttTt3737B.1.5260.00087
ORF1ab/nsp31467S1467FtCttTt3434B.1.5170.014518
ORF1ab/nsp31467S1467FtCttTt3434P.10.000536
ORF1ab/nsp31467S1467FtCttTt3333B.1.2430.002296
ORF1ab/nsp31467S1467FtCttTt3131B.1.1770.000408
ORF1ab/nsp31467S1467FtCttTt2929AY.1020.000769
ORF1ab/nsp31467S1467FtCttTt2828AY.410.00823
ORF1ab/nsp31467S1467FtCttTt2828B.1.1.2840.003007
ORF1ab/nsp31467S1467FtCttTt2525AY.50.000516
ORF1ab/nsp31467S1467FtCttTt2424AY.390.000593
ORF1ab/nsp31467S1467FtCttTt2223B.1.10.000399
ORF1ab/nsp31467S1467FtCTtTC123B.1.10.000018
ORF1ab/nsp31467S1467FtCttTt1818AY.1000.000828
ORF1ab/nsp31467S1467FtCttTt1818AY.470.00056
ORF1ab/nsp31467S1467FtCttTt1818B.1.1.10.00588
ORF1ab/nsp31467S1467FtCttTt1818B.1.1.5190.000715
ORF1ab/nsp31467S1467FtCttTt1818C.370.002089
ORF1ab/nsp31467S1467FtCttTt1616B.1.6370.001169
ORF1ab/nsp31467S1467FtCttTt1515B.1.1.4011
ORF1ab/nsp31467S1467FtCttTt1515B.1.4270.000757
ORF1ab/nsp31467S1467FtCttTt1212AY.60.000494
ORF1ab/nsp31467S1467FtCttTt1111AY.200.000428
ORF1ab/nsp31467S1467FtCttTt1111AY.230.000767
ORF1ab/nsp31467S1467FtCttTt1111AY.9.20.000404
ORF1ab/nsp31467S1467FtCttTt1111B.1.2210.000781
ORF1ab/nsp31467S1467FtCttTt1111B.1.5790.123596
ORF1ab/nsp31467S1467FtCttTt1111B.1.5960.000959
ORF1ab/nsp31467S1467FtCttTt1010B.1.2340.001319
ORF1ab/nsp31467S1467FtCttTt99AY.340.000873
ORF1ab/nsp31467S1467FtCttTt99AY.420.000362
ORF1ab/nsp31467S1467FtCttTt99AY.98.10.000436
ORF1ab/nsp31467S1467FtCttTt99B.1.220.011858
ORF1ab/nsp31467S1467FtCttTt99D.20.000675
ORF1ab/nsp31467S1467FtCttTt88AY.1170.000676
ORF1ab/nsp31467S1467FtCttTt88AY.1190.000282
ORF1ab/nsp31467S1467FtCttTt88B.1.1.3010.009434
ORF1ab/nsp31467S1467FtCttTt88B.1.3670.006339
ORF1ab/nsp31467S1467FtCttTt77AY.740.00081
ORF1ab/nsp31467S1467FtCttTt77B.1.5250.000792
ORF1ab/nsp31467S1467FtCttTt66AY.1130.000854
ORF1ab/nsp31467S1467FtCttTt66AY.320.003195
ORF1ab/nsp31467S1467FtCttTt66AY.46.40.000987
ORF1ab/nsp31467S1467FtCttTt66AY.540.000572
ORF1ab/nsp31467S1467FtCttTt66AY.90.000406
ORF1ab/nsp31467S1467FtCttTt66AY.900.004107
ORF1ab/nsp31467S1467FtCttTt66B.1.1.3060.00263
ORF1ab/nsp31467S1467FtCttTt66B.1.1.3110.002149
ORF1ab/nsp31467S1467FtCttTt66B.1.177.450.002287
ORF1ab/nsp31467S1467FtCttTt66B.1.177.90.007989
ORF1ab/nsp31467S1467FtCttTt66B.1.351.50.003597
ORF1ab/nsp31467S1467FtCttTt66R.10.00054
ORF1ab/nsp31467S1467FtCttTt55AY.190.005701
ORF1ab/nsp31467S1467FtCttTt55AY.7.20.002796
ORF1ab/nsp31467S1467FtCttTt55B.1.1.2070.00591
ORF1ab/nsp31467S1467FtCttTt55B.1.1.460.021834
ORF1ab/nsp31467S1467FtCttTt55B.1.2580.000333
ORF1ab/nsp31467S1467FtCttTt55B.1.3360.012195
ORF1ab/nsp31467S1467FtCttTt55B.40.011038
ORF1ab/nsp31467S1467FtCttTt55P.1.140.000239
ORF1ab/nsp31467S1467FtCttTt44AD.20.000876
ORF1ab/nsp31467S1467FtCttTt44AY.120.001264
ORF1ab/nsp31467S1467FtCttTt44AY.1200.000149
ORF1ab/nsp31467S1467FtCttTt44AY.610.000419
ORF1ab/nsp31467S1467FtCttTt44AY.9.10.000335
ORF1ab/nsp31467S1467FtCttTt44AY.980.000316
ORF1ab/nsp31467S1467FtCttTt44AY.99.20.000369
ORF1ab/nsp31467S1467FtCttTt44B.1.1.330.001684
ORF1ab/nsp31467S1467FtCttTt44B.1.177.570.001124
ORF1ab/nsp31467S1467FtCttTt44B.1.2650.005083
ORF1ab/nsp31467S1467FtCttTt44B.1.360.000584
ORF1ab/nsp31467S1467FtCttTt44B.1.5610.001588
ORF1ab/nsp31467S1467FtCttTt44B.60.00364
ORF1ab/nsp31467S1467FtCttTt44C.36.30.002269
ORF1ab/nsp31467S1467FtCttTt44P.1.70.001277
ORF1ab/nsp31467S1467FtCttTt44Q.80.00066
ORF1ab/nsp31467S1467FtCttTt33AY.1040.005952
ORF1ab/nsp31467S1467FtCttTt33AY.1090.002219
ORF1ab/nsp31467S1467FtCttTt33AY.1100.000338
ORF1ab/nsp31467S1467FtCttTt33AY.1180.000188
ORF1ab/nsp31467S1467FtCttTt33AY.270.000194
ORF1ab/nsp31467S1467FtCttTt33AY.360.000445
ORF1ab/nsp31467S1467FtCttTt33AY.4.2.10.000447
ORF1ab/nsp31467S1467FtCttTt33AY.460.000312
ORF1ab/nsp31467S1467FtCttTt33AY.630.001161
ORF1ab/nsp31467S1467FtCttTt33AY.850.001282
ORF1ab/nsp31467S1467FtCttTt33B.1.1.2220.000612
ORF1ab/nsp31467S1467FtCttTt33B.1.1.500.002037
ORF1ab/nsp31467S1467FtCttTt33B.1.1110.003525
ORF1ab/nsp31467S1467FtCttTt33B.1.1600.000094
ORF1ab/nsp31467S1467FtCttTt33B.1.177.810.000568
ORF1ab/nsp31467S1467FtCttTt33B.1.36.160.004274
ORF1ab/nsp31467S1467FtCttTt33B.1.6210.000266
ORF1ab/nsp31467S1467FtCttTt33Q.40.001364
ORF1ab/nsp31467S1467FtCttTt22AY.10.000791
ORF1ab/nsp31467S1467FtCttTt22AY.116.10.000623
ORF1ab/nsp31467S1467FtCttTt22AY.1210.000271
ORF1ab/nsp31467S1467FtCttTt22AY.160.000759
ORF1ab/nsp31467S1467FtCttTt22AY.220.004184
ORF1ab/nsp31467S1467FtCttTt22AY.240.000862
ORF1ab/nsp31467S1467FtCttTt22AY.260.000057
ORF1ab/nsp31467S1467FtCttTt22AY.330.000134
ORF1ab/nsp31467S1467FtCttTt22AY.39.10.000079
ORF1ab/nsp31467S1467FtCttTt22AY.39.20.003082
ORF1ab/nsp31467S1467FtCttTt22AY.4.40.000818
ORF1ab/nsp31467S1467FtCttTt22AY.4.50.000215
ORF1ab/nsp31467S1467FtCttTt22AY.560.00321
ORF1ab/nsp31467S1467FtCttTt22AY.590.001059
ORF1ab/nsp31467S1467FtCttTt22AY.70.000392
ORF1ab/nsp31467S1467FtCttTt22AY.730.001331
ORF1ab/nsp31467S1467FtCttTt22AY.75.10.000361
ORF1ab/nsp31467S1467FtCttTt22B.1.1.1640.010309
ORF1ab/nsp31467S1467FtCttTt22B.1.1.2720.010417
ORF1ab/nsp31467S1467FtCttTt22B.1.1.3050.007722
ORF1ab/nsp31467S1467FtCttTt22B.1.1.3180.000604
ORF1ab/nsp31467S1467FtCttTt22B.1.1.3690.000892
ORF1ab/nsp31467S1467FtCttTt22B.1.1.3980.006452
ORF1ab/nsp31467S1467FtCttTt22B.1.1.5230.003125
ORF1ab/nsp31467S1467FtCttTt22B.1.1.710.012121
ORF1ab/nsp31467S1467FtCttTt22B.1.177.40.000422
ORF1ab/nsp31467S1467FtCttTt22B.1.177.410.005
ORF1ab/nsp31467S1467FtCttTt22B.1.177.420.001789
ORF1ab/nsp31467S1467FtCttTt22B.1.2400.000431
ORF1ab/nsp31467S1467FtCttTt22B.1.258.220.005333
ORF1ab/nsp31467S1467FtCttTt22B.1.36.170.000988
ORF1ab/nsp31467S1467FtCttTt22B.1.36.180.00084
ORF1ab/nsp31467S1467FtCttTt22B.1.36.360.001204
ORF1ab/nsp31467S1467FtCttTt22B.1.3690.00057
ORF1ab/nsp31467S1467FtCttTt22B.1.4000.000858
ORF1ab/nsp31467S1467FtCttTt22B.1.5770.001375
ORF1ab/nsp31467S1467FtCttTt22B.1.6280.000705
ORF1ab/nsp31467S1467FtCttTt22B.30.001661
ORF1ab/nsp31467S1467FtCttTt22P.1.160.000748
ORF1ab/nsp31467S1467FtCttTt22P.1.170.000324
ORF1ab/nsp31467S1467FtCttTt22Q.30.00029
ORF1ab/nsp31467S1467FtCttTt110.055556
ORF1ab/nsp31467S1467FtCttTt11A.2.50.000499
ORF1ab/nsp31467S1467FtCttTt11A.50.001923
ORF1ab/nsp31467S1467FtCttTt11AE.30.032258
ORF1ab/nsp31467S1467FtCttTt11AE.80.000489
ORF1ab/nsp31467S1467FtCttTt11AP.10.001502
ORF1ab/nsp31467S1467FtCttTt11AY.1070.000466
ORF1ab/nsp31467S1467FtCttTt11AY.110.001339
ORF1ab/nsp31467S1467FtCttTt11AY.120.10.000321
ORF1ab/nsp31467S1467FtCttTt11AY.130.000161
ORF1ab/nsp31467S1467FtCttTt11AY.140.000088
ORF1ab/nsp31467S1467FtCttTt11AY.16.10.00047
ORF1ab/nsp31467S1467FtCttTt11AY.300.000396
ORF1ab/nsp31467S1467FtCttTt11AY.34.10.00051
ORF1ab/nsp31467S1467FtCttTt11AY.350.000233
ORF1ab/nsp31467S1467FtCttTt11AY.450.000122
ORF1ab/nsp31467S1467FtCttTt11AY.46.10.001027
ORF1ab/nsp31467S1467FtCttTt11AY.5.40.000277
ORF1ab/nsp31467S1467FtCttTt11AY.550.000917
ORF1ab/nsp31467S1467FtCttTt11AY.570.000656
ORF1ab/nsp31467S1467FtCttTt11AY.7.10.000113
ORF1ab/nsp31467S1467FtCttTt11AY.750.000056
ORF1ab/nsp31467S1467FtCttTt11AY.780.001541
ORF1ab/nsp31467S1467FtCttTt11AY.830.001724
ORF1ab/nsp31467S1467FtCttTt11AY.840.000437
ORF1ab/nsp31467S1467FtCttTt11AY.880.000884
ORF1ab/nsp31467S1467FtCttTt11AY.920.000287
ORF1ab/nsp31467S1467FtCttTt11AY.990.001049
ORF1ab/nsp31467S1467FtCttTt11B0.000128
ORF1ab/nsp31467S1467FtCttTt11B.1.1.1530.001095
ORF1ab/nsp31467S1467FtCttTt11B.1.1.2140.000055
ORF1ab/nsp31467S1467FtCttTt11B.1.1.3030.002762
ORF1ab/nsp31467S1467FtCttTt11B.1.1.3120.001912
ORF1ab/nsp31467S1467FtCttTt11B.1.1.3170.000412
ORF1ab/nsp31467S1467FtCttTt11B.1.1.3440.010753
ORF1ab/nsp31467S1467FtCttTt11B.1.1.3510.002793
ORF1ab/nsp31467S1467FtCttTt11B.1.1.3540.004386
ORF1ab/nsp31467S1467FtCttTt11B.1.1.3920.052632
ORF1ab/nsp31467S1467FtCttTt11B.1.1.4130.006897
ORF1ab/nsp31467S1467FtCttTt11B.1.1.4270.142857
ORF1ab/nsp31467S1467FtCttTt11B.1.1.5260.003546
ORF1ab/nsp31467S1467FtCttTt11B.1.1.670.004566
ORF1ab/nsp31467S1467FtCttTt11B.1.1.700.000341
ORF1ab/nsp31467S1467FtCttTt11B.1.1.750.010638
ORF1ab/nsp31467S1467FtCttTt11B.1.1.980.018519
ORF1ab/nsp31467S1467FtCttTt11B.1.1390.000733
ORF1ab/nsp31467S1467FtCttTt11B.1.1400.018868
ORF1ab/nsp31467S1467FtCttTt11B.1.177.100.000878
ORF1ab/nsp31467S1467FtCttTt11B.1.177.110.001698
ORF1ab/nsp31467S1467FtCttTt11B.1.177.120.000152
ORF1ab/nsp31467S1467FtCttTt11B.1.177.150.000631
ORF1ab/nsp31467S1467FtCttTt11B.1.177.170.000821
ORF1ab/nsp31467S1467FtCttTt11B.1.177.330.001645
ORF1ab/nsp31467S1467FtCttTt11B.1.177.400.005155
ORF1ab/nsp31467S1467FtCttTt11B.1.177.540.000606
ORF1ab/nsp31467S1467FtCttTt11B.1.177.600.000218
ORF1ab/nsp31467S1467FtCttTt11B.1.177.70.000165
ORF1ab/nsp31467S1467FtCttTt11B.1.177.840.006667
ORF1ab/nsp31467S1467FtCttTt11B.1.177.860.000183
ORF1ab/nsp31467S1467FtCttTt11B.1.2060.000816
ORF1ab/nsp31467S1467FtCttTt11B.1.214.20.0006
ORF1ab/nsp31467S1467FtCttTt11B.1.2290.009709
ORF1ab/nsp31467S1467FtCttTt11B.1.2390.001221
ORF1ab/nsp31467S1467FtCttTt11B.1.2410.000812
ORF1ab/nsp31467S1467FtCttTt11B.1.258.160.001637
ORF1ab/nsp31467S1467FtCttTt11B.1.3060.005714
ORF1ab/nsp31467S1467FtCttTt11B.1.3240.001605
ORF1ab/nsp31467S1467FtCttTt11B.1.351.30.000876
ORF1ab/nsp31467S1467FtCttTt11B.1.3550.011111
ORF1ab/nsp31467S1467FtCttTt11B.1.36.70.004
ORF1ab/nsp31467S1467FtCttTt11B.1.36.80.001
ORF1ab/nsp31467S1467FtCttTt11B.1.362.20.004717
ORF1ab/nsp31467S1467FtCttTt11B.1.3700.008
ORF1ab/nsp31467S1467FtCttTt11B.1.3960.000706
ORF1ab/nsp31467S1467FtCttTt11B.1.416.10.001563
ORF1ab/nsp31467S1467FtCttTt11B.1.438.10.000107
ORF1ab/nsp31467S1467FtCttTt11B.1.466.20.000391
ORF1ab/nsp31467S1467FtCttTt11B.1.4740.001901
ORF1ab/nsp31467S1467FtCttTt11B.1.564.10.001577
ORF1ab/nsp31467S1467FtCttTt11B.1.5730.006098
ORF1ab/nsp31467S1467FtCttTt11B.1.617.10.000129
ORF1ab/nsp31467S1467FtCttTt11B.1.6180.004032
ORF1ab/nsp31467S1467FtCttTt11B.1.619.10.000641
ORF1ab/nsp31467S1467FtCttTt11B.1.621.10.000506
ORF1ab/nsp31467S1467FtCttTt11B.1.80.001972
ORF1ab/nsp31467S1467FtCttTt11B.1.90.006173
ORF1ab/nsp31467S1467FtCttTt11N.30.005814
ORF1ab/nsp31467S1467FtCttTt11P.1.10.000318
ORF1ab/nsp31467S1467FtCttTt11P.1.80.004785
ORF1ab/nsp31467S1467FtCttTt11P.20.000187
ORF1ab/nsp31467S1467FtCttTt11P.50.013699
ORF1ab/nsp31467S1467FtCttTt11Q.10.000126
ORF1ab/nsp31467S1467FtCttTt11Q.70.001111