CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1443T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31443S1443TS2261TnonsynTctAct18160.8888897046-7048
ORF1ab/nsp31443S1443TS2261TnonsynTcTAcA1810.05555567046-7048
ORF1ab/nsp31443S1443TS2261TnonsynTcTAcC1810.05555567046-7048

Details of the mutation S1443T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31443S1443TTctAct1618All0.000003
ORF1ab/nsp31443S1443TTcTAcA118All0
ORF1ab/nsp31443S1443TTcTAcC118All0
ORF1ab/nsp31443S1443TTctAct44AY.23.10.001669
ORF1ab/nsp31443S1443TTctAct33AY.230.000209
ORF1ab/nsp31443S1443TTcTAcA12AY.250.000006
ORF1ab/nsp31443S1443TTcTAcC12AY.250.000006
ORF1ab/nsp31443S1443TTctAct11A.20.000662
ORF1ab/nsp31443S1443TTctAct11A.2.40.003367
ORF1ab/nsp31443S1443TTctAct11AY.1030.000006
ORF1ab/nsp31443S1443TTctAct11B.10.000009
ORF1ab/nsp31443S1443TTctAct11B.1.1.1740.003378
ORF1ab/nsp31443S1443TTctAct11B.1.1.390.00051
ORF1ab/nsp31443S1443TTctAct11B.1.1.70.000001
ORF1ab/nsp31443S1443TTctAct11B.1.4590.004082
ORF1ab/nsp31443S1443TTctAct11B.1.617.10.000129