CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1443A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31443S1443AS2261AnonsynTctGct24230.9583337046-7048
ORF1ab/nsp31443S1443AS2261AnonsynTcTGcG2410.04166677046-7048

Details of the mutation S1443A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31443S1443ATctGct2324All0.000004
ORF1ab/nsp31443S1443ATcTGcG124All0
ORF1ab/nsp31443S1443ATctGct1414B.1.1.70.000013
ORF1ab/nsp31443S1443ATctGct120.055556
ORF1ab/nsp31443S1443ATcTGcG120.055556
ORF1ab/nsp31443S1443ATctGct22B.1.4290.000047
ORF1ab/nsp31443S1443ATctGct11AY.40.000002
ORF1ab/nsp31443S1443ATctGct11AY.9.20.000037
ORF1ab/nsp31443S1443ATctGct11B.10.000009
ORF1ab/nsp31443S1443ATctGct11B.1.1.280.000311
ORF1ab/nsp31443S1443ATctGct11B.1.5230.002451
ORF1ab/nsp31443S1443ATctGct11B.1.5960.000087