CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1375del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31375S1375del1S2193del1deltcTtc-760.8571436842-6844
ORF1ab/nsp31375S1375del1S2193del1delTct-ct710.1428576842-6844

Details of the mutation S1375del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31375S1375del1tcTtc-67All0.000001
ORF1ab/nsp31375S1375del1Tct-ct17All0
ORF1ab/nsp31375S1375del1tcTtc-22B.10.000018
ORF1ab/nsp31375S1375del1tcTtc-11B.1.1.4480.002033
ORF1ab/nsp31375S1375del1tcTtc-11B.1.1.70.000001
ORF1ab/nsp31375S1375del1tcTtc-11B.1.177.70.000165
ORF1ab/nsp31375S1375del1tcTtc-11B.1.3690.000285
ORF1ab/nsp31375S1375del1Tct-ct11C.360.000911