CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1370F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31370S1370FS2188FnonsyntCttTt175517540.999436827-6829
ORF1ab/nsp31370S1370FS2188FnonsyntCTtTC175510.0005698016827-6829

Details of the mutation S1370F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31370S1370FtCttTt17541755All0.000335
ORF1ab/nsp31370S1370FtCTtTC11755All0
ORF1ab/nsp31370S1370FtCttTt475475AY.1080.523705
ORF1ab/nsp31370S1370FtCttTt407407AY.250.002448
ORF1ab/nsp31370S1370FtCttTt167167B.1.1.70.00015
ORF1ab/nsp31370S1370FtCttTt144144B.1.4290.003388
ORF1ab/nsp31370S1370FtCttTt6464AY.1110.011722
ORF1ab/nsp31370S1370FtCttTt5959AY.1030.000366
ORF1ab/nsp31370S1370FtCttTt4949B.1.1.2140.002717
ORF1ab/nsp31370S1370FtCttTt4141B.1.617.20.000154
ORF1ab/nsp31370S1370FtCttTt3737AY.40.000058
ORF1ab/nsp31370S1370FtCttTt3535AY.30.000348
ORF1ab/nsp31370S1370FtCttTt3232B.10.000293
ORF1ab/nsp31370S1370FtCttTt3030AY.430.000133
ORF1ab/nsp31370S1370FtCttTt2929B.1.1600.000904
ORF1ab/nsp31370S1370FtCttTt2020B.1.20.000176
ORF1ab/nsp31370S1370FtCttTt1818AY.980.001422
ORF1ab/nsp31370S1370FtCttTt1313AY.1000.000598
ORF1ab/nsp31370S1370FtCttTt1010B.1.1770.000132
ORF1ab/nsp31370S1370FtCttTt77B.1.2060.00571
ORF1ab/nsp31370S1370FtCttTt66B.1.6370.000438
ORF1ab/nsp31370S1370FtCttTt55AY.1190.000177
ORF1ab/nsp31370S1370FtCttTt55AY.450.000608
ORF1ab/nsp31370S1370FtCttTt55B.1.360.00073
ORF1ab/nsp31370S1370FtCttTt55P.10.000079
ORF1ab/nsp31370S1370FtCttTt44AY.1060.00134
ORF1ab/nsp31370S1370FtCttTt44AY.1170.000338
ORF1ab/nsp31370S1370FtCttTt44AY.420.000161
ORF1ab/nsp31370S1370FtCttTt34AY.440.000018
ORF1ab/nsp31370S1370FtCTtTC14AY.440.000006
ORF1ab/nsp31370S1370FtCttTt33AY.260.000085
ORF1ab/nsp31370S1370FtCttTt33AY.340.000291
ORF1ab/nsp31370S1370FtCttTt33AY.470.000093
ORF1ab/nsp31370S1370FtCttTt33AY.50.000062
ORF1ab/nsp31370S1370FtCttTt33AY.9.10.000251
ORF1ab/nsp31370S1370FtCttTt33B.1.2580.0002
ORF1ab/nsp31370S1370FtCttTt33B.1.466.20.001174
ORF1ab/nsp31370S1370FtCttTt33B.1.5260.000071
ORF1ab/nsp31370S1370FtCttTt220.111111
ORF1ab/nsp31370S1370FtCttTt22AY.1140.000462
ORF1ab/nsp31370S1370FtCttTt22AY.230.000139
ORF1ab/nsp31370S1370FtCttTt22AY.3.10.000171
ORF1ab/nsp31370S1370FtCttTt22AY.330.000134
ORF1ab/nsp31370S1370FtCttTt22AY.46.60.000144
ORF1ab/nsp31370S1370FtCttTt22AY.540.000191
ORF1ab/nsp31370S1370FtCttTt22AY.850.000854
ORF1ab/nsp31370S1370FtCttTt22B.1.617.10.000258
ORF1ab/nsp31370S1370FtCttTt22C.160.002121
ORF1ab/nsp31370S1370FtCttTt11AY.1180.000063
ORF1ab/nsp31370S1370FtCttTt11AY.1200.000037
ORF1ab/nsp31370S1370FtCttTt11AY.160.00038
ORF1ab/nsp31370S1370FtCttTt11AY.290.000016
ORF1ab/nsp31370S1370FtCttTt11AY.320.000532
ORF1ab/nsp31370S1370FtCttTt11AY.360.000148
ORF1ab/nsp31370S1370FtCttTt11AY.390.000025
ORF1ab/nsp31370S1370FtCttTt11AY.39.10.00004
ORF1ab/nsp31370S1370FtCttTt11AY.5.30.000337
ORF1ab/nsp31370S1370FtCttTt11AY.60.000041
ORF1ab/nsp31370S1370FtCttTt11AY.690.000187
ORF1ab/nsp31370S1370FtCttTt11AY.780.001541
ORF1ab/nsp31370S1370FtCttTt11AY.920.000287
ORF1ab/nsp31370S1370FtCttTt11B.1.10.000018
ORF1ab/nsp31370S1370FtCttTt11B.1.1.1410.002012
ORF1ab/nsp31370S1370FtCttTt11B.1.1.2220.000204
ORF1ab/nsp31370S1370FtCttTt11B.1.1.2420.043478
ORF1ab/nsp31370S1370FtCttTt11B.1.1.3060.000438
ORF1ab/nsp31370S1370FtCttTt11B.1.1.3070.002532
ORF1ab/nsp31370S1370FtCttTt11B.1.1.3480.000796
ORF1ab/nsp31370S1370FtCttTt11B.1.1.440.00241
ORF1ab/nsp31370S1370FtCttTt11B.1.1.5190.00004
ORF1ab/nsp31370S1370FtCttTt11B.1.1.700.000341
ORF1ab/nsp31370S1370FtCttTt11B.1.1280.000635
ORF1ab/nsp31370S1370FtCttTt11B.1.177.350.000691
ORF1ab/nsp31370S1370FtCttTt11B.1.177.80.000752
ORF1ab/nsp31370S1370FtCttTt11B.1.2100.002132
ORF1ab/nsp31370S1370FtCttTt11B.1.221.30.000833
ORF1ab/nsp31370S1370FtCttTt11B.1.3510.00003
ORF1ab/nsp31370S1370FtCttTt11B.1.5960.000087
ORF1ab/nsp31370S1370FtCttTt11B.1.6210.000089
ORF1ab/nsp31370S1370FtCttTt11Q.80.000165