CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1333R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31333S1333RS2151RnonsynagTagA1480.5714296716-6718
ORF1ab/nsp31333S1333RS2151RnonsynAgtCgt1430.2142866716-6718
ORF1ab/nsp31333S1333RS2151RnonsynagTagG1420.1428576716-6718
ORF1ab/nsp31333S1333RS2151RnonsynAgTCgC1410.07142866716-6718

Details of the mutation S1333R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31333S1333RagTagA814All0.000002
ORF1ab/nsp31333S1333RAgtCgt314All0.000001
ORF1ab/nsp31333S1333RagTagG214All0
ORF1ab/nsp31333S1333RAgTCgC114All0
ORF1ab/nsp31333S1333RagTagA55B.1.1.70.000004
ORF1ab/nsp31333S1333RAgtCgt22AY.430.000009
ORF1ab/nsp31333S1333RAgTCgC11AY.440.000006
ORF1ab/nsp31333S1333RagTagA11AY.75.10.00018
ORF1ab/nsp31333S1333RAgtCgt11B.10.000009
ORF1ab/nsp31333S1333RagTagG11B.1.10.000018
ORF1ab/nsp31333S1333RagTagA11B.1.1.100.001115
ORF1ab/nsp31333S1333RagTagG11B.1.5260.000024
ORF1ab/nsp31333S1333RagTagA11B.1.617.20.000004