CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1314del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31314S1314del1S2132del1delAGT-NN730.4285716659-6661
ORF1ab/nsp31314S1314del1S2132del1delagTag-730.4285716659-6661
ORF1ab/nsp31314S1314del1S2132del1delAGt-Tt710.1428576659-6661

Details of the mutation S1314del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31314S1314del1AGT-NN37All0.000001
ORF1ab/nsp31314S1314del1agTag-37All0.000001
ORF1ab/nsp31314S1314del1AGt-Tt17All0
ORF1ab/nsp31314S1314del1agTag-23AY.430.000009
ORF1ab/nsp31314S1314del1AGT-NN13AY.430.000004
ORF1ab/nsp31314S1314del1AGT-NN22AY.40.000003
ORF1ab/nsp31314S1314del1AGt-Tt11AY.250.000006
ORF1ab/nsp31314S1314del1agTag-11AY.30.00001