CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1314R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31314S1314RS2132RnonsynagTagG64540.843756659-6661
ORF1ab/nsp31314S1314RS2132RnonsynagTagA6480.1256659-6661
ORF1ab/nsp31314S1314RS2132RnonsynAgtCgt6420.031256659-6661

Details of the mutation S1314R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31314S1314RagTagG5464All0.00001
ORF1ab/nsp31314S1314RagTagA864All0.000002
ORF1ab/nsp31314S1314RAgtCgt264All0
ORF1ab/nsp31314S1314RagTagG4242B.1.177.810.007952
ORF1ab/nsp31314S1314RagTagA33B.1.1.70.000003
ORF1ab/nsp31314S1314RagTagG22AY.1030.000012
ORF1ab/nsp31314S1314RagTagG12AY.40.000002
ORF1ab/nsp31314S1314RagTagA12AY.40.000002
ORF1ab/nsp31314S1314RagTagG22AY.430.000009
ORF1ab/nsp31314S1314RagTagG22B.1.1770.000026
ORF1ab/nsp31314S1314RagTagG22B.1.617.20.000008
ORF1ab/nsp31314S1314RagTagG11AY.250.000006
ORF1ab/nsp31314S1314RagTagG11AY.30.00001
ORF1ab/nsp31314S1314RagTagA11B.10.000009
ORF1ab/nsp31314S1314RagTagA11B.1.160.160.000929
ORF1ab/nsp31314S1314RAgtCgt11B.1.20.000009
ORF1ab/nsp31314S1314RagTagA11B.1.2210.000071
ORF1ab/nsp31314S1314RagTagG11B.1.4270.00005
ORF1ab/nsp31314S1314RAgtCgt11B.1.4290.000024
ORF1ab/nsp31314S1314RagTagA11B.1.617.10.000129