CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1314I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31314S1314IS2132InonsynaGtaTt2782770.9964036659-6661
ORF1ab/nsp31314S1314IS2132InonsynaGTaTA27810.003597126659-6661

Details of the mutation S1314I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31314S1314IaGtaTt277278All0.000053
ORF1ab/nsp31314S1314IaGTaTA1278All0
ORF1ab/nsp31314S1314IaGtaTt135135AY.40.00021
ORF1ab/nsp31314S1314IaGtaTt1111AY.4.50.001182
ORF1ab/nsp31314S1314IaGtaTt1111B.1.1600.000343
ORF1ab/nsp31314S1314IaGtaTt99B.1.617.20.000034
ORF1ab/nsp31314S1314IaGtaTt88B.1.177.440.004152
ORF1ab/nsp31314S1314IaGtaTt66B.1.177.810.001136
ORF1ab/nsp31314S1314IaGtaTt55AY.1030.000031
ORF1ab/nsp31314S1314IaGtaTt55B.10.000046
ORF1ab/nsp31314S1314IaGtaTt55B.1.1770.000066
ORF1ab/nsp31314S1314IaGtaTt55B.1.2210.000355
ORF1ab/nsp31314S1314IaGtaTt44AY.390.000099
ORF1ab/nsp31314S1314IaGtaTt44AY.80.002424
ORF1ab/nsp31314S1314IaGtaTt44AY.90.00027
ORF1ab/nsp31314S1314IaGtaTt44B.1.160.320.017167
ORF1ab/nsp31314S1314IaGtaTt44B.1.258.170.000416
ORF1ab/nsp31314S1314IaGtaTt33B.1.1.390.001529
ORF1ab/nsp31314S1314IaGtaTt33B.1.1.70.000003
ORF1ab/nsp31314S1314IaGtaTt33B.1.1.700.001023
ORF1ab/nsp31314S1314IaGtaTt23B.1.160.160.001859
ORF1ab/nsp31314S1314IaGTaTA13B.1.160.160.000929
ORF1ab/nsp31314S1314IaGtaTt33B.1.177.430.004431
ORF1ab/nsp31314S1314IaGtaTt22AY.1020.000053
ORF1ab/nsp31314S1314IaGtaTt22AY.420.00008
ORF1ab/nsp31314S1314IaGtaTt22B.1.1.5190.000079
ORF1ab/nsp31314S1314IaGtaTt22B.1.160.110.011429
ORF1ab/nsp31314S1314IaGtaTt22B.1.160.150.009901
ORF1ab/nsp31314S1314IaGtaTt22B.1.160.200.017857
ORF1ab/nsp31314S1314IaGtaTt22B.1.160.90.014388
ORF1ab/nsp31314S1314IaGtaTt22B.1.2360.004107
ORF1ab/nsp31314S1314IaGtaTt22B.1.36.10.002281
ORF1ab/nsp31314S1314IaGtaTt22B.1.617.10.000258
ORF1ab/nsp31314S1314IaGtaTt22P.10.000032
ORF1ab/nsp31314S1314IaGtaTt11AF.10.037037
ORF1ab/nsp31314S1314IaGtaTt11AY.3.10.000085
ORF1ab/nsp31314S1314IaGtaTt11AY.4.20.000022
ORF1ab/nsp31314S1314IaGtaTt11AY.430.000004
ORF1ab/nsp31314S1314IaGtaTt11AY.440.000006
ORF1ab/nsp31314S1314IaGtaTt11AY.840.000437
ORF1ab/nsp31314S1314IaGtaTt11AY.870.000833
ORF1ab/nsp31314S1314IaGtaTt11B.1.1.370.000193
ORF1ab/nsp31314S1314IaGtaTt11B.1.1.4450.037037
ORF1ab/nsp31314S1314IaGtaTt11B.1.160.100.008065
ORF1ab/nsp31314S1314IaGtaTt11B.1.160.120.00641
ORF1ab/nsp31314S1314IaGtaTt11B.1.160.140.002119
ORF1ab/nsp31314S1314IaGtaTt11B.1.160.290.004219
ORF1ab/nsp31314S1314IaGtaTt11B.1.177.230.003236
ORF1ab/nsp31314S1314IaGtaTt11B.1.177.710.010101
ORF1ab/nsp31314S1314IaGtaTt11B.1.177.860.000183
ORF1ab/nsp31314S1314IaGtaTt11B.1.2580.000067
ORF1ab/nsp31314S1314IaGtaTt11B.1.36.350.002604
ORF1ab/nsp31314S1314IaGtaTt11B.1.6210.000089
ORF1ab/nsp31314S1314IaGtaTt11C.36.20.034483
ORF1ab/nsp31314S1314IaGtaTt11L.10.001905