CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1285F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31285S1285FS2103FnonsyntCttTt16775167740.999946572-6574
ORF1ab/nsp31285S1285FS2103FnonsyntCTtTC1677510.00005961256572-6574

Details of the mutation S1285F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31285S1285FtCttTt1677416775All0.003208
ORF1ab/nsp31285S1285FtCTtTC116775All0
ORF1ab/nsp31285S1285FtCttTt45964596B.1.1.70.004114
ORF1ab/nsp31285S1285FtCttTt33113311AY.40.005153
ORF1ab/nsp31285S1285FtCttTt13351336B.1.617.20.005027
ORF1ab/nsp31285S1285FtCTtTC11336B.1.617.20.000004
ORF1ab/nsp31285S1285FtCttTt815815AY.730.542249
ORF1ab/nsp31285S1285FtCttTt553553B.1.1.3260.973592
ORF1ab/nsp31285S1285FtCttTt471471AY.430.002087
ORF1ab/nsp31285S1285FtCttTt441441B.1.36.390.977827
ORF1ab/nsp31285S1285FtCttTt345345B.1.4290.008117
ORF1ab/nsp31285S1285FtCttTt243243B.1.20.00214
ORF1ab/nsp31285S1285FtCttTt239239B.10.002189
ORF1ab/nsp31285S1285FtCttTt239239B.1.6210.021156
ORF1ab/nsp31285S1285FtCttTt232232B.1.5260.005453
ORF1ab/nsp31285S1285FtCttTt226226B.1.1.2320.410163
ORF1ab/nsp31285S1285FtCttTt220220AY.1020.005833
ORF1ab/nsp31285S1285FtCttTt200200B.1.1.80.716846
ORF1ab/nsp31285S1285FtCttTt177177P.10.002788
ORF1ab/nsp31285S1285FtCttTt168168AY.440.001023
ORF1ab/nsp31285S1285FtCttTt168168B.1.1.5190.006671
ORF1ab/nsp31285S1285FtCttTt156156B.1.10.00283
ORF1ab/nsp31285S1285FtCttTt140140AY.30.001392
ORF1ab/nsp31285S1285FtCttTt9898AY.1030.000608
ORF1ab/nsp31285S1285FtCttTt9393AY.250.000559
ORF1ab/nsp31285S1285FtCttTt8383B.1.1.2341
ORF1ab/nsp31285S1285FtCttTt7979AK.11
ORF1ab/nsp31285S1285FtCttTt6969B.1.1770.000909
ORF1ab/nsp31285S1285FtCttTt5959AY.750.003305
ORF1ab/nsp31285S1285FtCttTt5959B.1.3510.001754
ORF1ab/nsp31285S1285FtCttTt5656AY.390.001384
ORF1ab/nsp31285S1285FtCttTt5252B.1.1.700.017735
ORF1ab/nsp31285S1285FtCttTt5050B.1.5250.005658
ORF1ab/nsp31285S1285FtCttTt5050C.370.005803
ORF1ab/nsp31285S1285FtCttTt4848Q.10.006064
ORF1ab/nsp31285S1285FtCttTt4747AY.1200.001747
ORF1ab/nsp31285S1285FtCttTt4242AY.1170.00355
ORF1ab/nsp31285S1285FtCttTt4040B.1.5370.8
ORF1ab/nsp31285S1285FtCttTt4040B.1.5820.019627
ORF1ab/nsp31285S1285FtCttTt3939AY.4.20.000846
ORF1ab/nsp31285S1285FtCttTt3939B.1.1260.049745
ORF1ab/nsp31285S1285FtCttTt3636AY.260.001019
ORF1ab/nsp31285S1285FtCttTt3636N.90.214286
ORF1ab/nsp31285S1285FtCttTt3535B.1.2210.002486
ORF1ab/nsp31285S1285FtCttTt3434B.1.6370.002484
ORF1ab/nsp31285S1285FtCttTt3232AY.60.001316
ORF1ab/nsp31285S1285FtCttTt3232P.1.150.007435
ORF1ab/nsp31285S1285FtCttTt2626B.1.1.2140.001442
ORF1ab/nsp31285S1285FtCttTt2626B.1.177.550.060606
ORF1ab/nsp31285S1285FtCttTt2525B.1.4270.001262
ORF1ab/nsp31285S1285FtCttTt2424AY.290.000379
ORF1ab/nsp31285S1285FtCttTt2323AY.200.000894
ORF1ab/nsp31285S1285FtCttTt2323B.1.1.2260.133721
ORF1ab/nsp31285S1285FtCttTt2222AK.21
ORF1ab/nsp31285S1285FtCttTt2222AY.1190.000777
ORF1ab/nsp31285S1285FtCttTt2222AY.50.000454
ORF1ab/nsp31285S1285FtCttTt2222B.1.1.3050.084942
ORF1ab/nsp31285S1285FtCttTt2121AY.1180.001316
ORF1ab/nsp31285S1285FtCttTt2020AY.610.002096
ORF1ab/nsp31285S1285FtCttTt1818AY.1000.000828
ORF1ab/nsp31285S1285FtCttTt1818AY.34.10.009179
ORF1ab/nsp31285S1285FtCttTt1717AY.1130.002421
ORF1ab/nsp31285S1285FtCttTt1717AY.420.000684
ORF1ab/nsp31285S1285FtCttTt1717AY.470.000529
ORF1ab/nsp31285S1285FtCttTt1717B.6.80.140496
ORF1ab/nsp31285S1285FtCttTt1616AY.98.10.000775
ORF1ab/nsp31285S1285FtCttTt1515P.1.140.000717
ORF1ab/nsp31285S1285FtCttTt1414B.1.1.280.004357
ORF1ab/nsp31285S1285FtCttTt1414B.1.1600.000437
ORF1ab/nsp31285S1285FtCttTt1414B.1.177.540.00849
ORF1ab/nsp31285S1285FtCttTt1313AY.530.003738
ORF1ab/nsp31285S1285FtCttTt1313B.1.1.2220.002652
ORF1ab/nsp31285S1285FtCttTt1313B.1.2430.000905
ORF1ab/nsp31285S1285FtCttTt1212AY.460.001249
ORF1ab/nsp31285S1285FtCttTt1212AY.7.10.001352
ORF1ab/nsp31285S1285FtCttTt1111AY.450.001339
ORF1ab/nsp31285S1285FtCttTt1111B.1.1.1760.004833
ORF1ab/nsp31285S1285FtCttTt1010AY.650.00533
ORF1ab/nsp31285S1285FtCttTt1010B.1.1.1210.024272
ORF1ab/nsp31285S1285FtCttTt1010B.1.4060.060606
ORF1ab/nsp31285S1285FtCttTt1010P.1.170.001618
ORF1ab/nsp31285S1285FtCttTt1010Q.80.001649
ORF1ab/nsp31285S1285FtCttTt99AY.75.10.001623
ORF1ab/nsp31285S1285FtCttTt99AY.840.003937
ORF1ab/nsp31285S1285FtCttTt99AY.930.002458
ORF1ab/nsp31285S1285FtCttTt99B.1.1.3180.002716
ORF1ab/nsp31285S1285FtCttTt99B.1.2580.000599
ORF1ab/nsp31285S1285FtCttTt99B.1.617.10.001161
ORF1ab/nsp31285S1285FtCttTt88AY.120.10.002568
ORF1ab/nsp31285S1285FtCttTt88AY.850.003417
ORF1ab/nsp31285S1285FtCttTt88B.1.1.4160.00724
ORF1ab/nsp31285S1285FtCttTt88B.1.2340.001056
ORF1ab/nsp31285S1285FtCttTt77AY.1010.003433
ORF1ab/nsp31285S1285FtCttTt77AY.1210.000947
ORF1ab/nsp31285S1285FtCttTt77AY.230.000488
ORF1ab/nsp31285S1285FtCttTt77AY.410.002058
ORF1ab/nsp31285S1285FtCttTt77AY.700.00146
ORF1ab/nsp31285S1285FtCttTt77AY.9.10.000586
ORF1ab/nsp31285S1285FtCttTt77AY.910.005113
ORF1ab/nsp31285S1285FtCttTt77B.1.1.3930.777778
ORF1ab/nsp31285S1285FtCttTt77B.1.1.4290.032258
ORF1ab/nsp31285S1285FtCttTt77B.1.258.170.000728
ORF1ab/nsp31285S1285FtCttTt77B.1.36.290.003621
ORF1ab/nsp31285S1285FtCttTt66AY.1070.002796
ORF1ab/nsp31285S1285FtCttTt66AY.140.000528
ORF1ab/nsp31285S1285FtCttTt66AY.330.000401
ORF1ab/nsp31285S1285FtCttTt66AY.4.50.000645
ORF1ab/nsp31285S1285FtCttTt66AY.540.000572
ORF1ab/nsp31285S1285FtCttTt66B.1.2650.007624
ORF1ab/nsp31285S1285FtCttTt66B.1.36.170.002964
ORF1ab/nsp31285S1285FtCttTt66B.1.5700.017647
ORF1ab/nsp31285S1285FtCttTt66B.1.5960.000523
ORF1ab/nsp31285S1285FtCttTt66P.20.00112
ORF1ab/nsp31285S1285FtCttTt66Q.40.002729
ORF1ab/nsp31285S1285FtCttTt55A.2.50.002495
ORF1ab/nsp31285S1285FtCttTt55AD.20.001095
ORF1ab/nsp31285S1285FtCttTt55AY.130.000805
ORF1ab/nsp31285S1285FtCttTt55AY.160.001898
ORF1ab/nsp31285S1285FtCttTt55AY.39.10.000198
ORF1ab/nsp31285S1285FtCttTt55B.1.1.2070.00591
ORF1ab/nsp31285S1285FtCttTt55B.1.1.2250.035971
ORF1ab/nsp31285S1285FtCttTt55B.1.1.3170.002058
ORF1ab/nsp31285S1285FtCttTt55B.1.1.3980.016129
ORF1ab/nsp31285S1285FtCttTt55B.1.177.330.008224
ORF1ab/nsp31285S1285FtCttTt55B.1.36.80.005
ORF1ab/nsp31285S1285FtCttTt55R.10.00045
ORF1ab/nsp31285S1285FtCttTt44AY.1140.000924
ORF1ab/nsp31285S1285FtCttTt44AY.340.000388
ORF1ab/nsp31285S1285FtCttTt44AY.360.000593
ORF1ab/nsp31285S1285FtCttTt44AY.46.40.000658
ORF1ab/nsp31285S1285FtCttTt44AY.980.000316
ORF1ab/nsp31285S1285FtCttTt44B.1.1.2160.003562
ORF1ab/nsp31285S1285FtCttTt44B.1.1.2690.005413
ORF1ab/nsp31285S1285FtCttTt44B.1.1.3850.017857
ORF1ab/nsp31285S1285FtCttTt44B.1.1.4200.004024
ORF1ab/nsp31285S1285FtCttTt44B.1.360.000584
ORF1ab/nsp31285S1285FtCttTt44P.1.120.001936
ORF1ab/nsp31285S1285FtCttTt44P.1.20.004624
ORF1ab/nsp31285S1285FtCttTt44P.1.40.003906
ORF1ab/nsp31285S1285FtCttTt44P.70.017467
ORF1ab/nsp31285S1285FtCttTt44Q.30.00058
ORF1ab/nsp31285S1285FtCttTt33A.10.000846
ORF1ab/nsp31285S1285FtCttTt33AY.1090.002219
ORF1ab/nsp31285S1285FtCttTt33AY.1100.000338
ORF1ab/nsp31285S1285FtCttTt33AY.16.10.00141
ORF1ab/nsp31285S1285FtCttTt33AY.240.001293
ORF1ab/nsp31285S1285FtCttTt33AY.270.000194
ORF1ab/nsp31285S1285FtCttTt33AY.320.001597
ORF1ab/nsp31285S1285FtCttTt33AY.4.40.001227
ORF1ab/nsp31285S1285FtCttTt33AY.590.001589
ORF1ab/nsp31285S1285FtCttTt33AY.680.000821
ORF1ab/nsp31285S1285FtCttTt33AY.690.00056
ORF1ab/nsp31285S1285FtCttTt33AY.710.001425
ORF1ab/nsp31285S1285FtCttTt33AY.740.000347
ORF1ab/nsp31285S1285FtCttTt33AY.9.20.00011
ORF1ab/nsp31285S1285FtCttTt33AY.99.20.000276
ORF1ab/nsp31285S1285FtCttTt33B.1.1.1150.026786
ORF1ab/nsp31285S1285FtCttTt33B.1.1.250.001706
ORF1ab/nsp31285S1285FtCttTt33B.1.1.2630.004673
ORF1ab/nsp31285S1285FtCttTt33B.1.1.3160.002775
ORF1ab/nsp31285S1285FtCttTt33B.1.1.370.000579
ORF1ab/nsp31285S1285FtCttTt33B.1.110.30.002155
ORF1ab/nsp31285S1285FtCttTt33B.1.177.40.000633
ORF1ab/nsp31285S1285FtCttTt33B.1.177.570.000843
ORF1ab/nsp31285S1285FtCttTt33B.1.2980.006342
ORF1ab/nsp31285S1285FtCttTt33B.1.351.20.000908
ORF1ab/nsp31285S1285FtCttTt33B.1.438.10.000322
ORF1ab/nsp31285S1285FtCttTt33B.1.5240.004219
ORF1ab/nsp31285S1285FtCttTt33B.1.5640.001278
ORF1ab/nsp31285S1285FtCttTt33B.1.60.051724
ORF1ab/nsp31285S1285FtCttTt33C.360.002732
ORF1ab/nsp31285S1285FtCttTt33P.1.70.000958
ORF1ab/nsp31285S1285FtCttTt33P.40.011407
ORF1ab/nsp31285S1285FtCttTt220.111111
ORF1ab/nsp31285S1285FtCttTt22A.280.005291
ORF1ab/nsp31285S1285FtCttTt22AY.100.00106
ORF1ab/nsp31285S1285FtCttTt22AY.1160.000574
ORF1ab/nsp31285S1285FtCttTt22AY.120.000632
ORF1ab/nsp31285S1285FtCttTt22AY.4.30.001684
ORF1ab/nsp31285S1285FtCttTt22AY.46.60.000144
ORF1ab/nsp31285S1285FtCttTt22AY.660.002139
ORF1ab/nsp31285S1285FtCttTt22AY.770.002255
ORF1ab/nsp31285S1285FtCttTt22AY.790.002421
ORF1ab/nsp31285S1285FtCttTt22AY.880.001768
ORF1ab/nsp31285S1285FtCttTt22AY.990.002099
ORF1ab/nsp31285S1285FtCttTt22B0.000256
ORF1ab/nsp31285S1285FtCttTt22B.1.1.1590.009346
ORF1ab/nsp31285S1285FtCttTt22B.1.1.2430.008163
ORF1ab/nsp31285S1285FtCttTt22B.1.1.2550.006061
ORF1ab/nsp31285S1285FtCttTt22B.1.1.2840.000215
ORF1ab/nsp31285S1285FtCttTt22B.1.1.3740.004751
ORF1ab/nsp31285S1285FtCttTt22B.1.177.190.002861
ORF1ab/nsp31285S1285FtCttTt22B.1.177.360.032258
ORF1ab/nsp31285S1285FtCttTt22B.1.177.430.002954
ORF1ab/nsp31285S1285FtCttTt22B.1.177.460.001837
ORF1ab/nsp31285S1285FtCttTt22B.1.177.600.000437
ORF1ab/nsp31285S1285FtCttTt22B.1.177.800.003824
ORF1ab/nsp31285S1285FtCttTt22B.1.177.90.002663
ORF1ab/nsp31285S1285FtCttTt22B.1.2400.000431
ORF1ab/nsp31285S1285FtCttTt22B.1.3050.004301
ORF1ab/nsp31285S1285FtCttTt22B.1.3110.000549
ORF1ab/nsp31285S1285FtCttTt22B.1.3490.00143
ORF1ab/nsp31285S1285FtCttTt22B.1.3600.025316
ORF1ab/nsp31285S1285FtCttTt22B.1.3690.00057
ORF1ab/nsp31285S1285FtCttTt22B.1.3750.001639
ORF1ab/nsp31285S1285FtCttTt22B.1.3810.015625
ORF1ab/nsp31285S1285FtCttTt22B.1.4040.002604
ORF1ab/nsp31285S1285FtCttTt22B.1.4160.002538
ORF1ab/nsp31285S1285FtCttTt22B.1.4990.002101
ORF1ab/nsp31285S1285FtCttTt22B.1.5610.000794
ORF1ab/nsp31285S1285FtCttTt22B.1.5650.001621
ORF1ab/nsp31285S1285FtCttTt22B.1.575.20.009615
ORF1ab/nsp31285S1285FtCttTt22B.1.5950.000522
ORF1ab/nsp31285S1285FtCttTt22B.1.6020.013072
ORF1ab/nsp31285S1285FtCttTt22B.1.6280.000705
ORF1ab/nsp31285S1285FtCttTt22B.1.6320.013423
ORF1ab/nsp31285S1285FtCttTt22B.280.006557
ORF1ab/nsp31285S1285FtCttTt22B.60.00182
ORF1ab/nsp31285S1285FtCttTt22N.50.003534
ORF1ab/nsp31285S1285FtCttTt11A0.000387
ORF1ab/nsp31285S1285FtCttTt11AH.20.012048
ORF1ab/nsp31285S1285FtCttTt11AY.10.000396
ORF1ab/nsp31285S1285FtCttTt11AY.1040.001984
ORF1ab/nsp31285S1285FtCttTt11AY.1060.000335
ORF1ab/nsp31285S1285FtCttTt11AY.1080.001103
ORF1ab/nsp31285S1285FtCttTt11AY.1110.000183
ORF1ab/nsp31285S1285FtCttTt11AY.120.20.001285
ORF1ab/nsp31285S1285FtCttTt11AY.220.002092
ORF1ab/nsp31285S1285FtCttTt11AY.280.00189
ORF1ab/nsp31285S1285FtCttTt11AY.29.10.000221
ORF1ab/nsp31285S1285FtCttTt11AY.300.000396
ORF1ab/nsp31285S1285FtCttTt11AY.4.2.10.000149
ORF1ab/nsp31285S1285FtCttTt11AY.400.000964
ORF1ab/nsp31285S1285FtCttTt11AY.46.10.001027
ORF1ab/nsp31285S1285FtCttTt11AY.480.000465
ORF1ab/nsp31285S1285FtCttTt11AY.5.30.000337
ORF1ab/nsp31285S1285FtCttTt11AY.5.40.000277
ORF1ab/nsp31285S1285FtCttTt11AY.510.000909
ORF1ab/nsp31285S1285FtCttTt11AY.550.000917
ORF1ab/nsp31285S1285FtCttTt11AY.560.001605
ORF1ab/nsp31285S1285FtCttTt11AY.580.000907
ORF1ab/nsp31285S1285FtCttTt11AY.670.000464
ORF1ab/nsp31285S1285FtCttTt11AY.70.000196
ORF1ab/nsp31285S1285FtCttTt11AY.720.001361
ORF1ab/nsp31285S1285FtCttTt11AY.870.000833
ORF1ab/nsp31285S1285FtCttTt11AY.890.004902
ORF1ab/nsp31285S1285FtCttTt11AY.900.000684
ORF1ab/nsp31285S1285FtCttTt11AY.940.000443
ORF1ab/nsp31285S1285FtCttTt11B.1.1.10.000327
ORF1ab/nsp31285S1285FtCttTt11B.1.1.100.001115
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1290.009174
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1410.002012
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1520.04
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1610.003534
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1640.005155
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1860.003436
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1890.001513
ORF1ab/nsp31285S1285FtCttTt11B.1.1.2210.010101
ORF1ab/nsp31285S1285FtCttTt11B.1.1.2650.003155
ORF1ab/nsp31285S1285FtCttTt11B.1.1.270.00565
ORF1ab/nsp31285S1285FtCttTt11B.1.1.2720.005208
ORF1ab/nsp31285S1285FtCttTt11B.1.1.2730.006757
ORF1ab/nsp31285S1285FtCttTt11B.1.1.2880.001916
ORF1ab/nsp31285S1285FtCttTt11B.1.1.3010.001179
ORF1ab/nsp31285S1285FtCttTt11B.1.1.3110.000358
ORF1ab/nsp31285S1285FtCttTt11B.1.1.3120.001912
ORF1ab/nsp31285S1285FtCttTt11B.1.1.330.000421
ORF1ab/nsp31285S1285FtCttTt11B.1.1.3400.045455
ORF1ab/nsp31285S1285FtCttTt11B.1.1.3480.000796
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ORF1ab/nsp31285S1285FtCttTt11B.1.351.30.000876
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ORF1ab/nsp31285S1285FtCttTt11B.560.028571
ORF1ab/nsp31285S1285FtCttTt11D.20.000075
ORF1ab/nsp31285S1285FtCttTt11P.1.160.000374
ORF1ab/nsp31285S1285FtCttTt11P.30.001595
ORF1ab/nsp31285S1285FtCttTt11Q.70.001111